Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2005 |
Symbol | |
ID | 3240561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2022567 |
End bp | 2023355 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637168691 |
Product | amino acid ABC transporter, amino acid-binding protein |
Protein accession | YP_189561 |
Protein GI | 57865360 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAC TTTTACTTTG CATTGTTGCA CTTGTTTTTG TTTTAGCAGC CTGTGGCAAC AATTCATCTA ACAATAAAGA TAATCAATCA AGCAGTAAAG ACAAGGATAC GTTAAGAGTT GGTACGGAAG GTACATATGC GCCCTTTACT TACCATAATA AAAATGATCA ATTAACAGGT TATGATATTG ATGTGATTAA AGCAGTTGCA AAAGAAGAAA ATCTTAAACT TAAGTTTAAT GAAACGTCAT GGGATTCAAT GTTTGCAGGA TTAGATGCTG GTCGTTTTGA TGTTATTGCA AATCAAGTGG GTGTGAATAA AGATAGAGAG AAAAAATATA AATTCTCTGA ACCTTACACA TATTCAAGTG CTGTACTTGT TGTTCGTGAA AATGAAAAAG ATATTACATC ATTCAATGAT GTAAAAGGTA AAAAGTTAGC ACAAACGTTT ACGTCTAATT ATGGTCAATT GGCTAAAGAT AAGGGTGCGG ACGTTACTAA GGTAGATGGA TTTAATCAAT CAATGGACTT ACTATTATCT AAACGTGTAG ATGGTACATT TAACGACAGT TTATCTTACT TAGATTACAG AAAACAAAAG CCTAATGCTA AAATTAAAGC AATCAAAGGA CATGCAGAGC AAAATAAATC AGCATTTGCA TTCTCTAAGA AGGTTGATGA AAAAACGATT GAGAAATTTA ATAAAGGCCT AGAAAAAATT AGAGATAATG GTGAATTAGC TAAAATTGGT AAGAAATGGT TTGGTCAAGA TGTTTCTAAA CCTGAATAA
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Protein sequence | MKRLLLCIVA LVFVLAACGN NSSNNKDNQS SSKDKDTLRV GTEGTYAPFT YHNKNDQLTG YDIDVIKAVA KEENLKLKFN ETSWDSMFAG LDAGRFDVIA NQVGVNKDRE KKYKFSEPYT YSSAVLVVRE NEKDITSFND VKGKKLAQTF TSNYGQLAKD KGADVTKVDG FNQSMDLLLS KRVDGTFNDS LSYLDYRKQK PNAKIKAIKG HAEQNKSAFA FSKKVDEKTI EKFNKGLEKI RDNGELAKIG KKWFGQDVSK PE
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