Gene SERP2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP2005 
Symbol 
ID3240561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp2022567 
End bp2023355 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content32% 
IMG OID637168691 
Productamino acid ABC transporter, amino acid-binding protein 
Protein accessionYP_189561 
Protein GI57865360 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAC TTTTACTTTG CATTGTTGCA CTTGTTTTTG TTTTAGCAGC CTGTGGCAAC 
AATTCATCTA ACAATAAAGA TAATCAATCA AGCAGTAAAG ACAAGGATAC GTTAAGAGTT
GGTACGGAAG GTACATATGC GCCCTTTACT TACCATAATA AAAATGATCA ATTAACAGGT
TATGATATTG ATGTGATTAA AGCAGTTGCA AAAGAAGAAA ATCTTAAACT TAAGTTTAAT
GAAACGTCAT GGGATTCAAT GTTTGCAGGA TTAGATGCTG GTCGTTTTGA TGTTATTGCA
AATCAAGTGG GTGTGAATAA AGATAGAGAG AAAAAATATA AATTCTCTGA ACCTTACACA
TATTCAAGTG CTGTACTTGT TGTTCGTGAA AATGAAAAAG ATATTACATC ATTCAATGAT
GTAAAAGGTA AAAAGTTAGC ACAAACGTTT ACGTCTAATT ATGGTCAATT GGCTAAAGAT
AAGGGTGCGG ACGTTACTAA GGTAGATGGA TTTAATCAAT CAATGGACTT ACTATTATCT
AAACGTGTAG ATGGTACATT TAACGACAGT TTATCTTACT TAGATTACAG AAAACAAAAG
CCTAATGCTA AAATTAAAGC AATCAAAGGA CATGCAGAGC AAAATAAATC AGCATTTGCA
TTCTCTAAGA AGGTTGATGA AAAAACGATT GAGAAATTTA ATAAAGGCCT AGAAAAAATT
AGAGATAATG GTGAATTAGC TAAAATTGGT AAGAAATGGT TTGGTCAAGA TGTTTCTAAA
CCTGAATAA
 
Protein sequence
MKRLLLCIVA LVFVLAACGN NSSNNKDNQS SSKDKDTLRV GTEGTYAPFT YHNKNDQLTG 
YDIDVIKAVA KEENLKLKFN ETSWDSMFAG LDAGRFDVIA NQVGVNKDRE KKYKFSEPYT
YSSAVLVVRE NEKDITSFND VKGKKLAQTF TSNYGQLAKD KGADVTKVDG FNQSMDLLLS
KRVDGTFNDS LSYLDYRKQK PNAKIKAIKG HAEQNKSAFA FSKKVDEKTI EKFNKGLEKI
RDNGELAKIG KKWFGQDVSK PE