Gene SERP1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1951 
Symbol 
ID3242458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1966538 
End bp1967206 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content33% 
IMG OID637168639 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_189509 
Protein GI57865387 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTAG TTGTTAAAGA TATAAGTAAA ACTTTTGGAG AAAAAACCTC AAAAACAGAG 
GTGTTAAAAG ATATTAACTT TGAAGTGAAA GATGGAGAAT TCATCATTTT AAATGGTGCT 
TCAGGATCAG GAAAAACAAC CTTATTAACT ATTTTAGGTG GTTTGTTATC TCAAACATCA 
GGTGATGTAG TATACGAGGG GAAATCCTTA TTTGAACGAC ATACTAATAA AGCGCACTTA 
AGACTAAATG ATATTGGTTT TATCTTTCAA GCCTCTCATT TAGTTCCATA CTTAAAAGTT 
TTAGACCAAC TAACCTTAAT AGGTAAAGAA ACTGGAATGT CTAGCAAAGA AGCTCAAGCA 
AGAGCTAAAG AATTATTAAC AAAAATTGGA TTAGAAGAGC AACTTAATAG CTACCCACAT 
ATGCTTTCAG GTGGACAACA ACAACGTGTA GCGATTATGA GAGCACTTAT GAATCATCCG 
AAAATTGTTT TAGCAGATGA ACCCACAGCA AGTCTTGATG CTAGTCGTGC TCAAGAGGTT 
GTTGAAATGA TCAGAAAACA AATAAAAGCT AACCAAATGA TAGGTATCAT GATTACTCAT 
GATGAAAGCT TGTTCAAATA CGCTGATCGT ATTGTTCAAT TGTACGATGG TAAAATAAAA 
AACAGTTAA
 
Protein sequence
MGLVVKDISK TFGEKTSKTE VLKDINFEVK DGEFIILNGA SGSGKTTLLT ILGGLLSQTS 
GDVVYEGKSL FERHTNKAHL RLNDIGFIFQ ASHLVPYLKV LDQLTLIGKE TGMSSKEAQA 
RAKELLTKIG LEEQLNSYPH MLSGGQQQRV AIMRALMNHP KIVLADEPTA SLDASRAQEV 
VEMIRKQIKA NQMIGIMITH DESLFKYADR IVQLYDGKIK NS