Gene SERP1935 details

Gene Information

• Locus tag: SERP1935
• Symbol: gltS
• ID: 3240437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 1951916
• End bp: 1953124
• Gene Length: 1209 bp
• Protein Length: 402 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637168624
• Product: sodium:glutamate symporter
• Protein accession: YP_189494
• Protein GI: 57867837
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0786] Na+/glutamate symporter
• TIGRFAM ID: [TIGR00210] sodium--glutamate symport carrier (gltS)

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGAAT TTGATGCAAT TACCACATTA TGTTTGGCAT GTGTTTTATA TTTAATTGGT 
CAAACAATAA TCAACCATGT TTCTATTTTA AGGCGAATCT GTATTCCAGC ACCTGTCATT 
GGTGGTCTTT TATTTGCAAT ATTAGTGGCT ATATTAGATT CATTTAATAT CGTTAAAATA 
AAACTTGATT CGGCGTTCAT TCAGAATTTC TTTATGCTCG CTTTCTTTAC TACAATTGGA 
CTTGGCGCAT CATTAAAACT ATTCAAAATT GGCGGAAAAG TCATGTTGAT TTATTTCACT 
TTTTGTGGAA TCATGGCTAT TTGTCAGAAT ATTATTGGTG TATCACTCGC TAAACTCTTA 
AACATTAAAC CTTTATTAGG TCTTACAGCA GGTTCAATGT CAATGGAAGG TGGTCACGGT 
AATGCTGCAG CTTATGGTAA AACCTTACAA GATATGGGTG TAGATTCTGC AGTTGCAGCT 
GCTTTAGCAG CCGCTACACT AGGCCTTGTA TTCGGTGGAC TCATTGGCGG TCCCATCGTT 
AAATATTTAA TAAAACGCTA TGATCTTAAG CCAGAGCATC GTGACGATTC ATTTAAAAAT 
TATGGTGTCG TTGAATACAA TCAATCATTA CATACAAAAT ATAAACCTAT TCAAGTCTTT 
TTTATACAAT TTTCTATACT CGTATTTTGC ATGGCATTAG GAACATATAT TGGCAATACT 
TTTACCGATT TAACCGGAGT TAATATTCCA ATGTATGTTG GTTCAATGTT TGTAGCAGTA 
ATTATTAGAA ATGCTACAGA CTTTATTGGT TGGGATATCG TTGATTTAAA AATGAGCGAA 
CAAATAGGTG ATATTTCATT AGGCATCTTT TTATCATTAG CTTTAATGAG TATCCAATTA 
ACTCAAATAT ATTCTTTAGC TATCCCACTA ATCATAATTG TTCTTGTACA AGTCGTATTT 
ATGGTACTAT TCTCGATTTT CATATTATTT AAAGGACTCG GTAAAGATTA TGACGCTGCT 
GTTATGGTAG GAGGATTTAT TGGCCATGGT CTGGGAGCAA CACCAAATGC GATGGCTAAT 
TTAGATGTTA TCACTAAAAA GTTTGGCAAC TCCCCTAAAG CATATCTAGT AGTTCCTATT 
GTTGGTGCTT TCCTCATCGA CTTAATCGGT GTAATTATTG TTATGAGTTT TATTCAACTT 
TTCAGTTAA 

 

Protein sequence

MIEFDAITTL CLACVLYLIG QTIINHVSIL RRICIPAPVI GGLLFAILVA ILDSFNIVKI 
KLDSAFIQNF FMLAFFTTIG LGASLKLFKI GGKVMLIYFT FCGIMAICQN IIGVSLAKLL 
NIKPLLGLTA GSMSMEGGHG NAAAYGKTLQ DMGVDSAVAA ALAAATLGLV FGGLIGGPIV 
KYLIKRYDLK PEHRDDSFKN YGVVEYNQSL HTKYKPIQVF FIQFSILVFC MALGTYIGNT 
FTDLTGVNIP MYVGSMFVAV IIRNATDFIG WDIVDLKMSE QIGDISLGIF LSLALMSIQL 
TQIYSLAIPL IIIVLVQVVF MVLFSIFILF KGLGKDYDAA VMVGGFIGHG LGATPNAMAN 
LDVITKKFGN SPKAYLVVPI VGAFLIDLIG VIIVMSFIQL FS