Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1907 |
Symbol | |
ID | 3241858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1926825 |
End bp | 1927460 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637168598 |
Product | HAD superfamily hydrolase |
Protein accession | YP_189468 |
Protein GI | 57867788 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAAG CTGTAGTGTT TGATTTTGAT GGTACTGTCA TTGATACCGA AAAGCATTTG TTCGATTTAA TAAATACACA TTTAAAAATC CATCAAGTAG CGCCGATTTC TTTAGAATTC TATAAACAAT TTATTGGCGG TGAAGCTACT GAATTACATA CATATTTAGA AGATGCTATT GGTTTCAAAA ATAAAGAAAA AATTTATGAT CAATATTATC AAACAAGTGT TGAATTGCCG GTAAATTCTA CAATCATTCA ATTGATGCAA TATTTAAAAA AACGTCATAT CCCAATGGCG ATTACTACAA GTAGTTATAA AAAGAATATA TATCCTATAT TTAATCAATT AGGACTAGAT ACATATATTG ATGTTGTTGT TGGTCGTGAA AATGTCGATA GTGTTCAACC TAATCCGGAA ATTTATTTAA AAGCCGTACA AGAGCTTAAT TATAATCCTA CAACCTGCTT AGCAATTGAA GATTCTGTCA ATGGTGCTAC TGCAGCGATG CTAGCAGGAT TAGATGTTGT CGTTAATACG AATATAATAA CGAAGGATCA AGATTTTTCG ACAGTTCAAT GTGTTGGACA GGATATGGAA TTTGAAGATA TAAAGAATTC TTTATTTAAA GAATAA
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Protein sequence | MYKAVVFDFD GTVIDTEKHL FDLINTHLKI HQVAPISLEF YKQFIGGEAT ELHTYLEDAI GFKNKEKIYD QYYQTSVELP VNSTIIQLMQ YLKKRHIPMA ITTSSYKKNI YPIFNQLGLD TYIDVVVGRE NVDSVQPNPE IYLKAVQELN YNPTTCLAIE DSVNGATAAM LAGLDVVVNT NIITKDQDFS TVQCVGQDME FEDIKNSLFK E
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