Gene SERP1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1819 
SymbolrplE 
ID3241241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1855983 
End bp1856522 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content34% 
IMG OID637168512 
Product50S ribosomal protein L5 
Protein accessionYP_189382 
Protein GI57867697 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.160424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACCGTT TAAAAGAAAA ATTTAATACA GAAGTTACTG AAAACTTAGT GAAAAAATTC 
AATTATAGTT CAGTGATGGA AGTACCAAAA ATTGAGAAAA TCGTTGTGAA TATGGGTGTA
GGTGACGCAG TTCAAAATTC TAAAGTTTTA GACAATGCTG TTGAAGAGTT AGAATTAATT
ACTGGTCAAA AACCATTAGT CACAAAAGCT AAAAAATCAG TTGCAACATT CCGTTTACGT
GAAGGTATGC CAATCGGTGC GAAAGTCACT CTTCGCGGAG AAAGAATGTA TGAATTCTTA
GACAAACTCA TTGCAGTTTC ATTACCACGT GTACGTGACT TCCAAGGTGT TTCTAAAACA
GCTTTTGATG GTCGTGGAAA TTACACACTT GGTGTTAAAG AACAATTAAT TTTCCCAGAA
ATTGACTACG ATAAAGTAAC AAAAGTTAGA GGAATGGATA TTGTTATCGT AACAACTGCT
AACACTGACG AGGAAGCTCG TGAATTGTTA ACAAACTTCG GTATGCCATT TCGTAAATAA
 
Protein sequence
MNRLKEKFNT EVTENLVKKF NYSSVMEVPK IEKIVVNMGV GDAVQNSKVL DNAVEELELI 
TGQKPLVTKA KKSVATFRLR EGMPIGAKVT LRGERMYEFL DKLIAVSLPR VRDFQGVSKT
AFDGRGNYTL GVKEQLIFPE IDYDKVTKVR GMDIVIVTTA NTDEEARELL TNFGMPFRK