Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1819 |
Symbol | rplE |
ID | 3241241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1855983 |
End bp | 1856522 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637168512 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_189382 |
Protein GI | 57867697 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.160424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACCGTT TAAAAGAAAA ATTTAATACA GAAGTTACTG AAAACTTAGT GAAAAAATTC AATTATAGTT CAGTGATGGA AGTACCAAAA ATTGAGAAAA TCGTTGTGAA TATGGGTGTA GGTGACGCAG TTCAAAATTC TAAAGTTTTA GACAATGCTG TTGAAGAGTT AGAATTAATT ACTGGTCAAA AACCATTAGT CACAAAAGCT AAAAAATCAG TTGCAACATT CCGTTTACGT GAAGGTATGC CAATCGGTGC GAAAGTCACT CTTCGCGGAG AAAGAATGTA TGAATTCTTA GACAAACTCA TTGCAGTTTC ATTACCACGT GTACGTGACT TCCAAGGTGT TTCTAAAACA GCTTTTGATG GTCGTGGAAA TTACACACTT GGTGTTAAAG AACAATTAAT TTTCCCAGAA ATTGACTACG ATAAAGTAAC AAAAGTTAGA GGAATGGATA TTGTTATCGT AACAACTGCT AACACTGACG AGGAAGCTCG TGAATTGTTA ACAAACTTCG GTATGCCATT TCGTAAATAA
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Protein sequence | MNRLKEKFNT EVTENLVKKF NYSSVMEVPK IEKIVVNMGV GDAVQNSKVL DNAVEELELI TGQKPLVTKA KKSVATFRLR EGMPIGAKVT LRGERMYEFL DKLIAVSLPR VRDFQGVSKT AFDGRGNYTL GVKEQLIFPE IDYDKVTKVR GMDIVIVTTA NTDEEARELL TNFGMPFRK
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