Gene SERP1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1805 
SymbolrpoA 
ID3241974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1848886 
End bp1849830 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content33% 
IMG OID637168498 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_189368 
Protein GI57867752 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAA TTGAAAAACC TAGAATTGAG ACAATTGAAG TTAGTGAAGA TGCTAAATTC 
GGTAAATTCG TTGTTGAACC ACTTGAACGT GGCTATGGTA CTACACTAGG AAACTCCTTA
CGTCGTATCC TACTATCTTC ATTACCAGGT GCAGCCGTTA AGTACATCGA GATTGAAGGA
GTTTTACACG AATTTTCAGC AGTAGATAAT GTAGTAGAAG ATGTTTCAAC AATCATTATG
AACATTAAAA AACTTGCATT AAAAATTTAC TCTGAAGAAG ATAAAACTTT AGAAATTGAT
GTTAAAGATG AAGGCGAAGT AACTGCAAGT GACATTACTC ACGACAGTGA TGTTGAGATT
TTAAATCCAG AGCTTAAAAT CGCAACAGTG TCTAAAGGTG GACATCTTAA AGTGCGTCTT
GTTGCTAATA AGGGTAGAGG TTACGCATTA GCTGAACAAA ATAATACTAG TGATTTACCA
ATTGGTGTAA TTCCTGTTGA TTCACTATAT TCACCTGTTG AACGTGTAAA CTATACAGTT
GAAAATACAC GCGTAGGTCA AAGTAGTGAT TTTGATAAAT TAACTTTAGA TGTTTGGACA
AATGGTTCAA TCACACCACA AGAGTCAGTA TCATTAGCAG CTAAAATAAT GACTGAACAC
TTGAATATCT TTGTAAGTCT AACTGATGAG GCTCAAAACG CTGAAATCAT GATTGAAAAA
GAAGAAGATC AAAAAGAAAA AGTACTTGAA ATGTCTATTG AAGAATTAGA CTTATCTGTA
CGTTCTTATA ACTGCTTAAA ACGCGCAGGA ATCAATTCTG TACAAGAGTT AGCTGATAAA
TCTGAAGCTG ACATGATGAA AGTGCGTAAT TTAGGTCGTA AATCTCTAGA AGAAGTAAAA
TATAAATTAG AAGATTTAGG ATTAGGATTA AGAAAAGAAG ATTGA
 
Protein sequence
MIEIEKPRIE TIEVSEDAKF GKFVVEPLER GYGTTLGNSL RRILLSSLPG AAVKYIEIEG 
VLHEFSAVDN VVEDVSTIIM NIKKLALKIY SEEDKTLEID VKDEGEVTAS DITHDSDVEI
LNPELKIATV SKGGHLKVRL VANKGRGYAL AEQNNTSDLP IGVIPVDSLY SPVERVNYTV
ENTRVGQSSD FDKLTLDVWT NGSITPQESV SLAAKIMTEH LNIFVSLTDE AQNAEIMIEK
EEDQKEKVLE MSIEELDLSV RSYNCLKRAG INSVQELADK SEADMMKVRN LGRKSLEEVK
YKLEDLGLGL RKED