Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1805 |
Symbol | rpoA |
ID | 3241974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1848886 |
End bp | 1849830 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637168498 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_189368 |
Protein GI | 57867752 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAAA TTGAAAAACC TAGAATTGAG ACAATTGAAG TTAGTGAAGA TGCTAAATTC GGTAAATTCG TTGTTGAACC ACTTGAACGT GGCTATGGTA CTACACTAGG AAACTCCTTA CGTCGTATCC TACTATCTTC ATTACCAGGT GCAGCCGTTA AGTACATCGA GATTGAAGGA GTTTTACACG AATTTTCAGC AGTAGATAAT GTAGTAGAAG ATGTTTCAAC AATCATTATG AACATTAAAA AACTTGCATT AAAAATTTAC TCTGAAGAAG ATAAAACTTT AGAAATTGAT GTTAAAGATG AAGGCGAAGT AACTGCAAGT GACATTACTC ACGACAGTGA TGTTGAGATT TTAAATCCAG AGCTTAAAAT CGCAACAGTG TCTAAAGGTG GACATCTTAA AGTGCGTCTT GTTGCTAATA AGGGTAGAGG TTACGCATTA GCTGAACAAA ATAATACTAG TGATTTACCA ATTGGTGTAA TTCCTGTTGA TTCACTATAT TCACCTGTTG AACGTGTAAA CTATACAGTT GAAAATACAC GCGTAGGTCA AAGTAGTGAT TTTGATAAAT TAACTTTAGA TGTTTGGACA AATGGTTCAA TCACACCACA AGAGTCAGTA TCATTAGCAG CTAAAATAAT GACTGAACAC TTGAATATCT TTGTAAGTCT AACTGATGAG GCTCAAAACG CTGAAATCAT GATTGAAAAA GAAGAAGATC AAAAAGAAAA AGTACTTGAA ATGTCTATTG AAGAATTAGA CTTATCTGTA CGTTCTTATA ACTGCTTAAA ACGCGCAGGA ATCAATTCTG TACAAGAGTT AGCTGATAAA TCTGAAGCTG ACATGATGAA AGTGCGTAAT TTAGGTCGTA AATCTCTAGA AGAAGTAAAA TATAAATTAG AAGATTTAGG ATTAGGATTA AGAAAAGAAG ATTGA
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Protein sequence | MIEIEKPRIE TIEVSEDAKF GKFVVEPLER GYGTTLGNSL RRILLSSLPG AAVKYIEIEG VLHEFSAVDN VVEDVSTIIM NIKKLALKIY SEEDKTLEID VKDEGEVTAS DITHDSDVEI LNPELKIATV SKGGHLKVRL VANKGRGYAL AEQNNTSDLP IGVIPVDSLY SPVERVNYTV ENTRVGQSSD FDKLTLDVWT NGSITPQESV SLAAKIMTEH LNIFVSLTDE AQNAEIMIEK EEDQKEKVLE MSIEELDLSV RSYNCLKRAG INSVQELADK SEADMMKVRN LGRKSLEEVK YKLEDLGLGL RKED
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