Gene SERP1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1788 
Symbol 
ID3241263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1833830 
End bp1834696 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content31% 
IMG OID637168481 
Producthypothetical protein 
Protein accessionYP_189351 
Protein GI57867718 
COG category[R] General function prediction only 
COG ID[COG4814] Uncharacterized protein with an alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCAA AATTCACAAT TCTATTATTT ACAATCTTTT CTACAACAGT ATTAGTTTTG 
GTTATTATTT ATAACAAAAC TCAATCCCAA TCATACATTT CGACTCACTA TTCTAATAAT
AAAATAAAAA CAACAGCAAC ACTTTTTTTA CATGGTTATG GTGGTAGCGA ACGCTCAGAA
ACGTTTATGG TCAAACAAGC GTTAAATAAA AATGTAACCA ATGAGGTGAT AACCGCTAGA
GTGAGTAGTG AAGGAAAAGT ATATTTTGAT AAAAAATTAA GTGAAGATGC AGCAAACCCT
ATTGTCAAAG TAGAATTTAA AGATAATAAA AATGGAAATT TTAAAGAAAA TGCTTATTGG
ATTAAAGAAG TTCTATCACA ACTAAAAAGT CAATTTGGAA TTCAACAATT TAATTTTGTA
GGACATTCAA TGGGGAACAT GTCATTTGCT TTTTACATGA AAAATTATGG GGACGATCGA
CATTTGCCAC AACTTAAAAA GGAAGTTAAT ATAGCGGGAG TTTATAACGG GATTTTGAAT
ATGAATGAGA ACGTGAATGA AATTATCGTT GATAAACAGG GGAAACCAAG TAGAATGAAT
GCCGCATATC GGCAATTGTT ATCACTGCAT AAGATTTATT GTGGTAAGGA AATAGAAGTT
TTAAATATCT ACGGAGATTT AGAAGATGGC TCACATTCAG ATGGACGTGT GTCAAATAGC
TCTTCTCAAT CGCTTCAATA TTTACTAAGA GGTAGCACTA AGTCTTATCA AGAAATGAAA
TTTAAAGGTG CAAAGGCACA ACATAGTCAA TTACATGAGA ATAAAGATGT TGCAAATGAA
ATCATACAAT TCTTATGGGA AACTTAA
 
Protein sequence
MKSKFTILLF TIFSTTVLVL VIIYNKTQSQ SYISTHYSNN KIKTTATLFL HGYGGSERSE 
TFMVKQALNK NVTNEVITAR VSSEGKVYFD KKLSEDAANP IVKVEFKDNK NGNFKENAYW
IKEVLSQLKS QFGIQQFNFV GHSMGNMSFA FYMKNYGDDR HLPQLKKEVN IAGVYNGILN
MNENVNEIIV DKQGKPSRMN AAYRQLLSLH KIYCGKEIEV LNIYGDLEDG SHSDGRVSNS
SSQSLQYLLR GSTKSYQEMK FKGAKAQHSQ LHENKDVANE IIQFLWET