Gene SERP1745 details

Gene Information

• Locus tag: SERP1745
• Symbol: deoC
• ID: 3242742
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 1784623
• End bp: 1785285
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637168430
• Product: deoxyribose-phosphate aldolase
• Protein accession: YP_189309
• Protein GI: 57867629
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0274] Deoxyribose-phosphate aldolase
• TIGRFAM ID: [TIGR00126] deoxyribose-phosphate aldolase

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAG CAAAATTGAT AGACCATACA TTATTAAAAA CCGATTCAAC AAAGGAACAA 
ATAGATACAA TTATAAATGA AGCAAAAGCA TATCAGTTTA AGTCTGTATG TGTGAACCCT 
ACACATGTAC AATATGCATC TGAACAACTT AAAGGAACAG ACGTTTTAGT GTGTACTGTT 
ATTGGATTTC CACTAGGTGC AACAACTACA GCGGTTAAAT CTTATGAAAC AAAAGATGCG 
ATTAACAATG GTGCCCAAGA GATTGATATG GTGATAAATA TTGGAGCACT TAAGGATGGT 
CGTTTTGATA AAGTGCAAAA TGATATCGAA GCCGTCGTTC AAGCAGCCAA TGGTAAAACA 
GTTAAGGTAA TTATTGAGAC TGTTTTATTA ACTGAGAAAG AGAAGATTAA AGCATGTCAA 
TTATCTGAAG CGGCAGGTGC ACATTTTGTT AAAACATCCA CAGGTTTTGC TGGTGGGGGT 
GCAACAGTTG AAGATGTAAA ATTAATGAAA GATACTGTTG GTGATCGTTT AGAAGTAAAA 
GCGTCAGGTG GCGTGAGAAA TCTAGAGGAT TTTAATAATA TGATTGAAGC GGGTGCTACA 
CGTATTGGTG CTAGTGCCGG TGTGCAAATT ATTCAAGGAC TTGAATCAAA TACTGATTAC 
TAA 

 

Protein sequence

MNKAKLIDHT LLKTDSTKEQ IDTIINEAKA YQFKSVCVNP THVQYASEQL KGTDVLVCTV 
IGFPLGATTT AVKSYETKDA INNGAQEIDM VINIGALKDG RFDKVQNDIE AVVQAANGKT 
VKVIIETVLL TEKEKIKACQ LSEAAGAHFV KTSTGFAGGG ATVEDVKLMK DTVGDRLEVK 
ASGGVRNLED FNNMIEAGAT RIGASAGVQI IQGLESNTDY