| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1729 |
|---|
| Symbol | |
|---|
| ID | 3242710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1766042 |
|---|
| End bp | 1767469 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637168414 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_189293 |
|---|
| Protein GI | 57867597 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00132327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAATT TCACTAAACA ATATATAAAC GGTGAATGGG TTGATAGTGC AAGCGGTGAA
ACTATTGATG TTATTAACCC TGCAACTGAA GAAGTAATGG GTAAAATTGC TAAAGGTAAC
GAAGAAGATG TTAATAAAGC TGTAGATGCT GCAGATAAAG TATATTTAGA ATTTAGACAT
AGTTCTGTTG AAGAAAGAAG AGAACTTTTA GATAAAATCG TAAAAGAATA TCAAAATAGA
AAAAATGATT TAATTGAAGC AATTACTGAT GAACTAGGAG CGCCTTTATC AGTTTCCGAG
AACGTTCATT ATCAAATGGG ATTGAATCAT TTTACAGCTG CAAGAGATGC TTTAGATAGC
TTCCAATTTG AAGAACAACG TGGCGATGAT TTGGTTGTTA AAGAAGCAAT TGGAGTTGCT
GGACTTGTTA CACCTTGGAA TTTCCCTACA AACCAAACTT CACTTAAATT AGCTGCTGCG
TTTGCTGCTG GTAGCCCTGT TGTTTTAAAA CCATCTGAAG AAACACCATT TGCTGCAATT
ATTTTAGCAG AAATTTTTGA TAAAGTAGGC GTACCTAAAG GTGTGTTTAA CTTAGTCAAT
GGTGATGGAT CTGGAGTAGG AAATCCTTTA AGTGAACATC CAAAAGTAAG AATGATGTCA
TTTACAGGTT CTGGTCCTAC AGGTTCAAAA ATTATGGAAA AAGCTGCAAA AGACTTCAAA
AAAGTGTCTC TTGAATTGGG TGGGAAATCA CCTTATATCG TATTAGATGA CGTTGATGTT
GAAGAAGCTG CTAATGCAAC AACGAAAAAA GTAGTTAACA ATACAGGTCA AGTTTGTACT
GCAGGAACAC GTGTACTTAT TCCTGAAAGT ATTAAAGAAG ACTACTTAAC AGCAGTTAAA
GAAGCATTTA GTAAAGTTAA AGTAGGTCAA CCAAGAGAAG AAGGAACTCA AGTAGGTCCT
ATTATTAGTA AAAAACAATT TGATCAAGTT CAGGATTACA TTGATAAAGG TATCAATGAA
GGAGCAGAGT TATTCTACGG TGGTCCAGGT AAACCAGAAG GATTAGATAA AGGATATTTT
GCGCGTCCAA CTATATTTAT TAATGTAGAT AATCACATGA CGATTGCACA AGAAGAAATT
TTCGGACCTG TCATGTCTGT AATCACTTAT AATAATCTTG ACGAAGCTAT TGAAATTGCT
AATGATACTA AATATGGTCT TGCTGGCTAT GTTATTGGTA AAGATAAAGA TACATTGAGA
CATGTTGCTC GTTCAATCGA AGCTGGTACA ATTGAAATTA ATGAAGCTGG TAGAAAACCA
GACTTACCAT TCGGTGGTTA TAAAGAATCT GGCTTAGGTC GTGAATGGGG CGATTATGGT
ATCGAAGAAT TCTTAGAAGT AAAATCAATA GCTGGATATT TTAAATAA
|
|---|
| Protein sequence | MRNFTKQYIN GEWVDSASGE TIDVINPATE EVMGKIAKGN EEDVNKAVDA ADKVYLEFRH
SSVEERRELL DKIVKEYQNR KNDLIEAITD ELGAPLSVSE NVHYQMGLNH FTAARDALDS
FQFEEQRGDD LVVKEAIGVA GLVTPWNFPT NQTSLKLAAA FAAGSPVVLK PSEETPFAAI
ILAEIFDKVG VPKGVFNLVN GDGSGVGNPL SEHPKVRMMS FTGSGPTGSK IMEKAAKDFK
KVSLELGGKS PYIVLDDVDV EEAANATTKK VVNNTGQVCT AGTRVLIPES IKEDYLTAVK
EAFSKVKVGQ PREEGTQVGP IISKKQFDQV QDYIDKGINE GAELFYGGPG KPEGLDKGYF
ARPTIFINVD NHMTIAQEEI FGPVMSVITY NNLDEAIEIA NDTKYGLAGY VIGKDKDTLR
HVARSIEAGT IEINEAGRKP DLPFGGYKES GLGREWGDYG IEEFLEVKSI AGYFK
|
|---|
| |