Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1719 |
Symbol | glyA |
ID | 3242156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1757744 |
End bp | 1758982 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637168404 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_189283 |
Protein GI | 57867665 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTATA TCGAGAAAAA GGATAAAGTT GTTTACGATG CTATTCAAAA GGAGTTTCAA CGACAAAATA GTAATATTGA ACTCATTGCA TCAGAAAATT TCGTATCACA AGCAGTTATG GAAGCCCAAG GTTCAGTATT AACGAATAAA TATGCTGAGG GTTATCCTGG GCGTCGTTAT TATGGAGGGT GTGAGCATGT AGATGTAACT GAGTCCATTG CCATTGAAAG AGCAAAAGCT TTATTTGGAG CAGAACATGT TAATGTTCAA CCCCATTCAG GTTCTCAAGC TAATATGGCT GTGTATTTGG TTGCTTTAGA AATGGGCGAT ACTGTGTTAG GTATGAATTT GAGTCATGGT GGTCATTTAA CACATGGGGC AACTGTCAAT TTTAGTGGTA AATTTTATCA TTTTGTTGAA TATGGTGTGG ACCAAGAAAA TGAATTAATA AACTATGATG AAGTGAGACG TTTAGCAATT GAGCATCAAC CTAAATTAAT TGTAGCTGGT GCTTCAGCAT ATTCAAGAAC TATTGACTTT AAAAAATTTA AAGAAATTGC TGATGAAGTA GGAGCTAAAT TGATGGTAGA TATGGCACAT ATTGCTGGTT TAGTAGCTGC TGGTTTACAT CCTAATCCTG TAGAATATGC TGATTTTGTG ACTACTACAA CTCATAAAAC TTTACGCGGT CCACGTGGTG GTATGATTTT ATGTAAAGAA GAATATAAAA AAGATATAGA TAAAACAATC TTCCCAGGTA TTCAAGGCGG TCCATTAGAA CATGTCATCG CCGCAAAAGC TGTTGCATTT GGAGAAGCTT TGAACGACGA TTTTAAAGAT TATCAAAATC AAGTCATTAA AAATGCACAA GCTTTAGCTC AAACATTAAT TGAAGAAGGC TTCAGAGTTG TATCTGGCGG AACAGACAAT CATTTAGTTG CAGTTGATGT TAAAGGTTCT ATCAATATGA CTGGTAAATT AGCTGAAGAG ACACTTGATA AAGTAGGAAT TACATGTAAT AAGAATACTA TTCCATTTGA TAAAGAAAAA CCGTTTGTAA CAAGTGGTGT TAGACTAGGA ACACCAGCAG CTACAACTCG TGGTTTTGAT GAATCTGCAT TTGTGGAAGT AGCAAAAATT ATTAGTTTAG CATTAAATAA CTATGATAAT GATACTAAAC TAAATGAAGC TAAAGAGAGA GTTCACGCAC TCACATCTAA ATATCCATTA TATAATTAA
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Protein sequence | MSYIEKKDKV VYDAIQKEFQ RQNSNIELIA SENFVSQAVM EAQGSVLTNK YAEGYPGRRY YGGCEHVDVT ESIAIERAKA LFGAEHVNVQ PHSGSQANMA VYLVALEMGD TVLGMNLSHG GHLTHGATVN FSGKFYHFVE YGVDQENELI NYDEVRRLAI EHQPKLIVAG ASAYSRTIDF KKFKEIADEV GAKLMVDMAH IAGLVAAGLH PNPVEYADFV TTTTHKTLRG PRGGMILCKE EYKKDIDKTI FPGIQGGPLE HVIAAKAVAF GEALNDDFKD YQNQVIKNAQ ALAQTLIEEG FRVVSGGTDN HLVAVDVKGS INMTGKLAEE TLDKVGITCN KNTIPFDKEK PFVTSGVRLG TPAATTRGFD ESAFVEVAKI ISLALNNYDN DTKLNEAKER VHALTSKYPL YN
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