Gene SERP1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1719 
SymbolglyA 
ID3242156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1757744 
End bp1758982 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content35% 
IMG OID637168404 
Productserine hydroxymethyltransferase 
Protein accessionYP_189283 
Protein GI57867665 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTATA TCGAGAAAAA GGATAAAGTT GTTTACGATG CTATTCAAAA GGAGTTTCAA 
CGACAAAATA GTAATATTGA ACTCATTGCA TCAGAAAATT TCGTATCACA AGCAGTTATG
GAAGCCCAAG GTTCAGTATT AACGAATAAA TATGCTGAGG GTTATCCTGG GCGTCGTTAT
TATGGAGGGT GTGAGCATGT AGATGTAACT GAGTCCATTG CCATTGAAAG AGCAAAAGCT
TTATTTGGAG CAGAACATGT TAATGTTCAA CCCCATTCAG GTTCTCAAGC TAATATGGCT
GTGTATTTGG TTGCTTTAGA AATGGGCGAT ACTGTGTTAG GTATGAATTT GAGTCATGGT
GGTCATTTAA CACATGGGGC AACTGTCAAT TTTAGTGGTA AATTTTATCA TTTTGTTGAA
TATGGTGTGG ACCAAGAAAA TGAATTAATA AACTATGATG AAGTGAGACG TTTAGCAATT
GAGCATCAAC CTAAATTAAT TGTAGCTGGT GCTTCAGCAT ATTCAAGAAC TATTGACTTT
AAAAAATTTA AAGAAATTGC TGATGAAGTA GGAGCTAAAT TGATGGTAGA TATGGCACAT
ATTGCTGGTT TAGTAGCTGC TGGTTTACAT CCTAATCCTG TAGAATATGC TGATTTTGTG
ACTACTACAA CTCATAAAAC TTTACGCGGT CCACGTGGTG GTATGATTTT ATGTAAAGAA
GAATATAAAA AAGATATAGA TAAAACAATC TTCCCAGGTA TTCAAGGCGG TCCATTAGAA
CATGTCATCG CCGCAAAAGC TGTTGCATTT GGAGAAGCTT TGAACGACGA TTTTAAAGAT
TATCAAAATC AAGTCATTAA AAATGCACAA GCTTTAGCTC AAACATTAAT TGAAGAAGGC
TTCAGAGTTG TATCTGGCGG AACAGACAAT CATTTAGTTG CAGTTGATGT TAAAGGTTCT
ATCAATATGA CTGGTAAATT AGCTGAAGAG ACACTTGATA AAGTAGGAAT TACATGTAAT
AAGAATACTA TTCCATTTGA TAAAGAAAAA CCGTTTGTAA CAAGTGGTGT TAGACTAGGA
ACACCAGCAG CTACAACTCG TGGTTTTGAT GAATCTGCAT TTGTGGAAGT AGCAAAAATT
ATTAGTTTAG CATTAAATAA CTATGATAAT GATACTAAAC TAAATGAAGC TAAAGAGAGA
GTTCACGCAC TCACATCTAA ATATCCATTA TATAATTAA
 
Protein sequence
MSYIEKKDKV VYDAIQKEFQ RQNSNIELIA SENFVSQAVM EAQGSVLTNK YAEGYPGRRY 
YGGCEHVDVT ESIAIERAKA LFGAEHVNVQ PHSGSQANMA VYLVALEMGD TVLGMNLSHG
GHLTHGATVN FSGKFYHFVE YGVDQENELI NYDEVRRLAI EHQPKLIVAG ASAYSRTIDF
KKFKEIADEV GAKLMVDMAH IAGLVAAGLH PNPVEYADFV TTTTHKTLRG PRGGMILCKE
EYKKDIDKTI FPGIQGGPLE HVIAAKAVAF GEALNDDFKD YQNQVIKNAQ ALAQTLIEEG
FRVVSGGTDN HLVAVDVKGS INMTGKLAEE TLDKVGITCN KNTIPFDKEK PFVTSGVRLG
TPAATTRGFD ESAFVEVAKI ISLALNNYDN DTKLNEAKER VHALTSKYPL YN