| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1709 |
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| Symbol | atpD |
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| ID | 3242139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1749333 |
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| End bp | 1750745 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637168395 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_189274 |
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| Protein GI | 57867649 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.118931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATTG GCCGTGTAAC TCAAGTTATG GGTCCAGTAA TAGATGTTCG TTTTGAACAT
AACGAAGTAC CTGAGATAAA TAATGCATTA CACATCGAAG TTCCTAAAGA AGATGGAGCG
CTTCAATTAA CATTAGAAGT TGCACTTCAA CTAGGTGACG ATGTAGTTCG TACAATTGCA
ATGGACTCAA CTGACGGCGT TCAAAGAGGA ATGGAAGTTA AAGATACAGG TAGAGACATA
AGTGTACCTG TCGGTGACGT AACTCTAGGA AGAGTGTTTA ACGTACTAGG AGAAACTATT
GACTTAGATG AAAAAATTGA TGATTCAGTA CGACGTGACC CTATCCATAG ACAAGCTCCA
GGATTCGACG AATTATCAAC AAAAGTAGAA ATCTTAGAAA CTGGTATTAA AGTAGTAGAC
TTATTAGCAC CTTACATAAA AGGTGGTAAA ATTGGATTAT TTGGTGGTGC CGGTGTAGGT
AAAACCGTAC TAATCCAAGA ACTTATTAAT AACATCGCTC AAGAACACGG TGGTATCTCA
GTATTCGCTG GTGTTGGTGA ACGTACACGT GAAGGTAATG ATCTTTACTA TGAAATGAGT
GACAGTGGTG TTATCAAGAA AACTGCAATG GTCTTTGGTC AAATGAATGA GCCACCTGGT
GCACGTATGC GTGTAGCATT ATCCGGATTA ACAATGGCCG AATATTTCCG AGATGAAGAA
GGCCAAGATG TGTTATTATT CATTGATAAC ATTTTCAGAT TCACTCAAGC TGGTTCAGAA
GTTTCTGCGT TATTAGGTCG TATGCCATCA GCTGTTGGTT ATCAACCTAC ACTTGCTACA
GAAATGGGTC AATTACAAGA ACGTATAAGT TCAACAAATA AAGGTTCAGT TACATCAATT
CAAGCTGTTT TCGTACCAGC CGATGACTAT ACTGACCCTG CGCCAGCAAC AACGTTCGCA
CACTTAGATT CAACAACAAA CTTAGAGCGT AAATTAACAG AAATGGGTAT TTATCCAGCT
GTAGACCCGC TTGCTTCTAC ATCTAGAGCT TTGGAACCTT CAGTAGTAGG TCAAGAGCAT
TATGATGTGG CACGTGAAGT TCAATCTACT TTACAAAAAT ATAGAGAGTT ACAAGATATT
ATTGCGATTC TTGGTATGGA TGAATTATCA GATGAAGATA AACAAACTGT GGAACGAGCA
CGTAGAATTC AATTCTTCTT ATCACAAAAC TTCCACGTTG CAGAACAATT TACTGGACAA
AAAGGTTCAT ATGTACCTGT TAAAACAACA GTTGCAGACT TCAGAGATAT TTTAGATGGT
AAGTATGACC ATATTCCTGA AGACGCATTC CGTTTAGTAG GTAGCATGGA AGACGTAATT
GAGAAAGCAA AAGATATGGG TGTTGAAGTC TAA
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| Protein sequence | MGIGRVTQVM GPVIDVRFEH NEVPEINNAL HIEVPKEDGA LQLTLEVALQ LGDDVVRTIA
MDSTDGVQRG MEVKDTGRDI SVPVGDVTLG RVFNVLGETI DLDEKIDDSV RRDPIHRQAP
GFDELSTKVE ILETGIKVVD LLAPYIKGGK IGLFGGAGVG KTVLIQELIN NIAQEHGGIS
VFAGVGERTR EGNDLYYEMS DSGVIKKTAM VFGQMNEPPG ARMRVALSGL TMAEYFRDEE
GQDVLLFIDN IFRFTQAGSE VSALLGRMPS AVGYQPTLAT EMGQLQERIS STNKGSVTSI
QAVFVPADDY TDPAPATTFA HLDSTTNLER KLTEMGIYPA VDPLASTSRA LEPSVVGQEH
YDVAREVQST LQKYRELQDI IAILGMDELS DEDKQTVERA RRIQFFLSQN FHVAEQFTGQ
KGSYVPVKTT VADFRDILDG KYDHIPEDAF RLVGSMEDVI EKAKDMGVEV
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