| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1665 |
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| Symbol | ilvD |
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| ID | 3240605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 1702964 |
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| End bp | 1704652 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637168346 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_189230 |
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| Protein GI | 57867557 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.361875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAGTG ATATGATCAA AAAAGGAGAT CACCAAGCTC CTGCAAGAAG TCTTTTACAT
GCGACTGGCG CTCTTAAACA ACCTACAGAT ATGAATAAAC CTTTCGTAGC AATTTGTAAC
TCTTATATTG ATATTGTTCC TGGGCACGTT CATTTAAGAG AATTAGCAGA CATCGCAAAG
GAAGCTATTA GAGAAGCAGG TGCTATCCCA TTCGAATTTA ATACTATTGG TGTTGACGAT
GGAATAGCTA TGGGACATAT TGGCATGAGA TATTCCTTAC CTTCAAGAGA AATTATCGCA
GATGCAGCTG AAACAGTTAT TAACGCTCAT TGGTTTGATG GTGTTTTTTA CATTCCTAAT
TGCGATAAAA TTACGCCAGG AATGTTACTC GCAGCTGTTA GAACAAATGT ACCAGCTATC
TTTTGCTCAG GAGGCCCAAT GAAAGCTGGT CTTTCCGCTC AAGGTAAGGC ATTGACATTA
TCTTCAATGT TTGAAGCGGT TGGAGCTTTT AAAGAAGGAA CAATCTCAAA AGAAGCATTT
TTAGACATGG AGCAAAACGC TTGTCCTACA TGTGGTTCGT GCGCCGGTAT GTTTACCGCA
AACTCAATGA ACTGTTTAAT GGAAGTTTTA GGTTTAGCCC TACCATATAA TGGTACAGCT
CTAGCTGTGA GTGACCAACG TCGTGAAATG ATTAGACAAG CTGCATTCAG GTTGGTTGAA
AATATTAAAA ATGATATTAA ACCTCGCGAT ATTATCACAC AAGATGCAAT TGATGATGCT
TTTGCTCTTG ATATGGCCAT GGGAGGTTCT ACTAATACTG TTCTTCATAC TCTTGCAATT
GCAAATGAAG CAGGTATTGA CTACGATTTA GAACGTATTA ATGAAATTGC TAAAAAAACA
CCTTACCTTT CTAAAATTGC ACCTAGTTCT TCTTATTCTA TGCACGATGT TCATGAAGCA
GGTGGCGTCC CAGCTATTAT AAATGAATTG ATGAAAAAGG ATGGTACTTT ACATCCGGAT
AGATTAACAG TTACGGGTAA AACCTTGAGA GAAAATAATG AAGGTAAAAA CATCAAAAAT
TTTGATGTTA TTCATCCTCT TGAAAACCCT TATGATAAAC AAGGTGGATT ATCTGTTTTA
TTCGGAAACC TCGCACCTAA AGGAGCGGTA ATCAAGGTCG GTGGAGTTGA TCCTTCAATT
AAAGTATTTA CAGGAAAGGC AATTTGTTTT AACTCTCATG ATGAAGCTGT TGAAGCCATT
GATAATCATA CAGTAAGAGA AGGACATGTT GTTGTTATTA GATATGAGGG ACCTAAGGGA
GGTCCTGGAA TGCCAGAAAT GCTAGCCCCT ACGTCTTCCA TAGTGGGCAG AGGATTAGGT
AAAGATGTTG CATTAATTAC GGACGGTAGA TTTTCGGGAG CAACTAGAGG TATTGCAGTT
GGACATATTT CACCTGAAGC CGCTTCAGGT GGACCCATTG GCTTAATAAG AGATGGTGAT
AAAATTACGA TTGATTTAAT CAATAGAACT CTAAACGTCA ATCAATCTGA AGAAGAACTG
TATCGCCGTA AAAATCAGCT TGAACCATTC AGAGCAAAGG TTAAAACAGG CTACTTAGCT
AGATATACTA GTTTAGTCAC AAGCGCTAAT ACTGGAGGTA TTATGCAAGT TCCGGAAAAC
CTTATTTAA
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| Protein sequence | MRSDMIKKGD HQAPARSLLH ATGALKQPTD MNKPFVAICN SYIDIVPGHV HLRELADIAK
EAIREAGAIP FEFNTIGVDD GIAMGHIGMR YSLPSREIIA DAAETVINAH WFDGVFYIPN
CDKITPGMLL AAVRTNVPAI FCSGGPMKAG LSAQGKALTL SSMFEAVGAF KEGTISKEAF
LDMEQNACPT CGSCAGMFTA NSMNCLMEVL GLALPYNGTA LAVSDQRREM IRQAAFRLVE
NIKNDIKPRD IITQDAIDDA FALDMAMGGS TNTVLHTLAI ANEAGIDYDL ERINEIAKKT
PYLSKIAPSS SYSMHDVHEA GGVPAIINEL MKKDGTLHPD RLTVTGKTLR ENNEGKNIKN
FDVIHPLENP YDKQGGLSVL FGNLAPKGAV IKVGGVDPSI KVFTGKAICF NSHDEAVEAI
DNHTVREGHV VVIRYEGPKG GPGMPEMLAP TSSIVGRGLG KDVALITDGR FSGATRGIAV
GHISPEAASG GPIGLIRDGD KITIDLINRT LNVNQSEEEL YRRKNQLEPF RAKVKTGYLA
RYTSLVTSAN TGGIMQVPEN LI
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