Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1619 |
Symbol | |
ID | 3240596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1642111 |
End bp | 1644396 |
Gene Length | 2286 bp |
Protein Length | 761 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637168300 |
Product | hypothetical protein |
Protein accession | YP_189184 |
Protein GI | 57867548 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00216862 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG AATTTAAAGA ATTTAGAGAG AGATTAGTAG TAAGTAAGCA GCTATTCTAT AATGATAGTA GCATGTTTGG TGCTTATGGT TTTAGCTTTG AAGGAGAAAT TAACCCGGAG ATAACAGTTC ATCCTCAATA TAGAAATTTT TCTATTGCTG GTAATGTTCA GCCATTAGTA GAAGGAGAGG CTTATACTGT TAGATTTAAA GAGAGCTACG ATGAAAGAAG AAAAATTGAT ACATATACTT TTATTGAAGT GGAGTCAGAT GGTATTTCAG GCAAAAAGGC GAATGAAGAG TTTTTAAGAG TAATATTGAC AGATAATCAA GCGGAAGCAA TTATTGATGA ATTTGGTTAT AGTGACGAGT TAGTAAAAGA TATTCTTAAT GACAAGGTTG ATATTACAGA AGTAAAAGGA ATTAAGAGTG CTACTGCTTT ATCCATTAAA GAAAAGCTTA CTGAGATGTC TAAGTATAGC AAGGCAGTTA TAGAGTTAGC ACCCTTAGGA GCGAGTATTA AAGCAGTTGT TTCTCTAGCC GATCATTATG GATCAGTAGA AAAATTATTA CATATCATAG AAAATAATAT ATATGATTTG ACATCTGCTG GTGGCTTTGG TTTTAAGCGT ATAGATGAAT ATGGCTTGAA AAAAGGTATT AGTATTGACT CACCACAAAG AATTAGAGCT GGTGCTTTAT ACGTTATAGA ACAAATGGTA GCACTTGGAG ATACAAAGCT TAGTATTGAT AAATTTGAAG AAAACTTATG TGACATATTA GAAATTGATG AGGTTGACGA TGAAACATTT AGTTTGATTA TCAACGATCC GAATGTATAT TACGACAATG GATATATCAG TTTAAAGAAA TATCGAAGAG AAGAAGAACT AATCGTAGAG CATTTAAGAA GAATAAGAGA TAGTTTCACC TCATATGATA CAAACGAGCT TGAAGATATT ATCAAAATGA ATGAGGATCG ACTAGGTTTC ACATTCAATG AGCAGCAAAA AGAAGCGATT AGGAAAGCTG TAAGCAACGG AGTATTTATA CTTGATGGAC TCGCTGGTTC AGGTAAGACT TCAAGTTTAA AAACCGCAAT TGATATTATC GGTTTACCAC ATGTTGCTTG TGCATTGAGT GGTAAAGCAG CAAACGTACT GTCACAAAAC GGACTAAAAG CAAAAACTAT ACATAGAACA CTTAGATTTG ATCCAGTGAA TTTTGGTTTT TTACATAACG AAGAAAACCC ATTGAGCGAA AAAGTAGTTA TTCTAGATGA AGCCTCAATG GTTGATAATA AACTGTTTTT AGACTTAATT AAAGCTGTGG AAAGCGGTTC TCAATTAATG ATTGTAGGAG ACAGTGGACA ATTACCTTCG ATCAGTAGAG GAGCAGTATT TGACAACTTA CTTGATACAA CAGAATTTGA ACATGTAACT CTAACTGAGG TACATAGACA AGCAAAAGAG TCTGGCACAT TACAAGTTGC TAACAAGATA CGTGAAGGTA CTCAATTTAA TGGTTACACT GATTATGGCT TAACTGTTTA TGGTGATAAC AAAGATTTTT ATTACTTTGG TTTCCAAGAT AGAGCGGCTA TTAAAGATAA TTTATTACAT ACTGTGAAAC GTTATTTAAG TAATAAGGAT ATGAACCCAA ATGATATTCA AGTTATTACT GGTTTAAAAG AAAAAGGAGA ATTGTCAGTA GTTAACTTGA ATAAAGAATT ACAAGAATTG TTTAACCCTC AGAAAATAGT TCAAAATACA TTGACTGGTA AGGTTTATGA GTTTAGAAAA GGTGACAGGG TTATTCAGCA AGGTAACAAA TACACTGCTA GAACATTAGG TTATAGTGAT TTCCAAGATG TAGCGAATGG CTTTGCGTTA TTGGAAAACA AGACTTTCGA AGAAACTGAA GTATTTAACG GTACATTTGG AGAAATCATT GAATGTGCAA GTGGTGTAGG AATGTTGATT AAATTTGAGG GTGTGGAAGA ATTAGTATTC TACGAACATA CTCAGAAAAC TAACGAGATA GGTATAATTG ATTTAGGATA TGCAATTAGT TGTCACCGTT CACAAGGTAG CGGGTTTAAA ACATTGGTTG GTGCATTATC ATTTAGTGAT TACATGTTGC TAAGTAGACA ATTTTTATAC ACAATGCTAA CTAGAACGAT CAATCAATGT TTCTTATTTG CAGAAACATC AGCAGTACAT TATTCGATTA AAACTGATAA AGGTAAAACT AGAAAATGTT TTATCAGTGA ATTTTTAGAA CACTAA
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Protein sequence | MEKEFKEFRE RLVVSKQLFY NDSSMFGAYG FSFEGEINPE ITVHPQYRNF SIAGNVQPLV EGEAYTVRFK ESYDERRKID TYTFIEVESD GISGKKANEE FLRVILTDNQ AEAIIDEFGY SDELVKDILN DKVDITEVKG IKSATALSIK EKLTEMSKYS KAVIELAPLG ASIKAVVSLA DHYGSVEKLL HIIENNIYDL TSAGGFGFKR IDEYGLKKGI SIDSPQRIRA GALYVIEQMV ALGDTKLSID KFEENLCDIL EIDEVDDETF SLIINDPNVY YDNGYISLKK YRREEELIVE HLRRIRDSFT SYDTNELEDI IKMNEDRLGF TFNEQQKEAI RKAVSNGVFI LDGLAGSGKT SSLKTAIDII GLPHVACALS GKAANVLSQN GLKAKTIHRT LRFDPVNFGF LHNEENPLSE KVVILDEASM VDNKLFLDLI KAVESGSQLM IVGDSGQLPS ISRGAVFDNL LDTTEFEHVT LTEVHRQAKE SGTLQVANKI REGTQFNGYT DYGLTVYGDN KDFYYFGFQD RAAIKDNLLH TVKRYLSNKD MNPNDIQVIT GLKEKGELSV VNLNKELQEL FNPQKIVQNT LTGKVYEFRK GDRVIQQGNK YTARTLGYSD FQDVANGFAL LENKTFEETE VFNGTFGEII ECASGVGMLI KFEGVEELVF YEHTQKTNEI GIIDLGYAIS CHRSQGSGFK TLVGALSFSD YMLLSRQFLY TMLTRTINQC FLFAETSAVH YSIKTDKGKT RKCFISEFLE H
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