Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1601 |
Symbol | |
ID | 3241633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1630198 |
End bp | 1631241 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637168282 |
Product | phage integrase family site specific recombinase |
Protein accession | YP_189166 |
Protein GI | 57867512 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000019197 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCTT TATCAAAAGT AGAATTAAAT CAAAAGGTAA CACATTTTAA TATGAAATTA ACTGAGTTGA TCGAGAACTA TTCGAATGAA GTTGGTATCA ATTCAGAGAG AACTAAAATT GCGTATAGAG ATGATGTAGC ACAATTCTTT AAATATTTTA ATTGTAATAA TGAAAGTACA ACTGACGTTG TGTACATAAT TTTTACAAGA AATAATATTG TTAAGTATCG CTCATACTTA TTAGAAGAGA AGAAGTTAAG TGCTAGTACG ATCAATCGTA AAATGTGTGC TTTAAAAGAG TTCATTAAAT ATCTTTCATC ATATGGTTAT GATATTGATA TTAATATCAT TAATCAATTA TCTAAATTAA AAACAACTAA TAATTCGTAC GAAGCTTTAT CACTTGAAGA GGCATATGCT TTAATAAATT GGATCAAAGA TAATGAGAAT AGAAAAGCTT TAGATAAGTA TTACTACTGT TTATTAGCAC TTGATACTGG AGTGCGTGCA GAAGCATTAA ATAAATTAAC TAAAGCGTCA TTTATTATTA AAGAAGATGA AGTGATTGTT AAAGGTGTCG ATAAAGGTAA AAAAGCTTAT ACTAAAGTCA TTAGTCGTGA GTTTTATGAT AATATGCACA ATGATTTAAA ATTCGATCAA CTTAACTTAA CTGATAACAT CTTTAATTTC TCAGGGAAAA ATAGAACTGA CATGTTAAAT AGGGCTAAAA AGTCTTTAGG TTGGGAAAAT AGAAATATAA CATTCCATAG TTTTAAAAAA GGTGCAGTAA CATACGCATA TGAATGCACA AAGGATATAA GAGTAGCCAT GAATGTTGGT AGCCATAGTA ACATGGAAAC TACTCAACGT TATATAGCTG ATAATGAAGA AGCTTTTAAA GGAGCAGTAT CTAATAACTT CGCAACTGGA GTTAAAGATG TAGATTTTAA TAATTTTGAA AAGGATCAAC TAATTGAAGT GTTAAAATCA TTACCAGAAG CTATTCAACT TCAAGTTAAA ACCGAATTGA ATAAAATTAA GTAA
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Protein sequence | MNALSKVELN QKVTHFNMKL TELIENYSNE VGINSERTKI AYRDDVAQFF KYFNCNNEST TDVVYIIFTR NNIVKYRSYL LEEKKLSAST INRKMCALKE FIKYLSSYGY DIDINIINQL SKLKTTNNSY EALSLEEAYA LINWIKDNEN RKALDKYYYC LLALDTGVRA EALNKLTKAS FIIKEDEVIV KGVDKGKKAY TKVISREFYD NMHNDLKFDQ LNLTDNIFNF SGKNRTDMLN RAKKSLGWEN RNITFHSFKK GAVTYAYECT KDIRVAMNVG SHSNMETTQR YIADNEEAFK GAVSNNFATG VKDVDFNNFE KDQLIEVLKS LPEAIQLQVK TELNKIK
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