Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1545 |
Symbol | |
ID | 3241598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1597240 |
End bp | 1598040 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 637168226 |
Product | hypothetical protein |
Protein accession | YP_189110 |
Protein GI | 57867477 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000999442 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG CATATTTAAA TGATTTACAT ATTGATAGCT GGATAAAATT TAATAATAAC GAACATAAAA ACAGAAAAAA GATAGAAGAA TTTATTAATA CTATATTCTC TAAAAGTGAA AAAGAATGTT TAGAAGCTGA GATTTTAGTG ATTGCTGGAG ATATTTCACA TCACAATAGT ATTAGTAAGT TAACTATTGA AGTATTCTCA AAGTATTTCA ATAAAGTATA TGTTGTGTTA GGAAATCATG ATTACTATTT AATTAGTAAA ACACAAATGA GAAGATACAA GGCTAATAGT TTAAATAGAA TTATAGAATT AAATGATATG TTGGCAGATA ATGAGCGTGT AGTATTATTA CATAGTGCTG TTAACAAGGT TACTGATATA TACAAAGGTT TAAGAATTGC TGGTTGTACA ATGACGAGTA AGCCTAATAC AGAAGAAGAG ATTAGTTTCT ATAATGGTTT TATGAATGAT AGTAGATATA TCCCAAATAA AGTAAACGAC TTAAACAGTA TGGATATGAA ATCATATGAA GATATTAAAG AGTTTAAACC AGATTTGTTT ATTTCTCATT ATCCACTATT AATGACTTAT AGTCATAAAC TACATTTACA TGATGGATCA AATGGAAGTT TCTTATGCAA AGTTGACGAA CATATTGCTC CAATAAATTT TTTTGGTCAT GTGCATGAAA GAGGAGATTA TGATATAGGC AGTTCGTTTT ATACCAATGC AATTGGTTAT AAAGGTGAAT TGAGTAATGA GACAATTGCT TTAAAAGTAA TCAATATATA A
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Protein sequence | MKIAYLNDLH IDSWIKFNNN EHKNRKKIEE FINTIFSKSE KECLEAEILV IAGDISHHNS ISKLTIEVFS KYFNKVYVVL GNHDYYLISK TQMRRYKANS LNRIIELNDM LADNERVVLL HSAVNKVTDI YKGLRIAGCT MTSKPNTEEE ISFYNGFMND SRYIPNKVND LNSMDMKSYE DIKEFKPDLF ISHYPLLMTY SHKLHLHDGS NGSFLCKVDE HIAPINFFGH VHERGDYDIG SSFYTNAIGY KGELSNETIA LKVINI
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