Gene SERP1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1488 
Symbol 
ID3241946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1556812 
End bp1557606 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content32% 
IMG OID637168170 
Productcarbon-nitrogen family hydrolase 
Protein accessionYP_189054 
Protein GI57867367 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.810367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATATAT TGAAAATCCA AATACTTCAA TTCAATGTAG AACGTGGAAA TGTTGATAAA 
AATATGCAAA ATATCAAAAC TAAGTTTAAT CAATACTTAG ATAAAGATAC CAGTGTCGTC
GTGCTTCCAG AAATGTGGAA TAACGGTTAT GCATTAGAAG AATTAGAACA AAAAGCTGAT
AAAAATCTTA AAGACAGCTC TCTCTTTATA AAAGACTTAG CACATACATT TAATGTAGAT
ATCATTGCAG GTTCAGTGTC AAATATAAGA GAAAACCATA TATATAATAC TGCTTTTGCA
ATTAATAAAA ACAAAGAATT GATTAATGAA TATGACAAAG TACATCTCGT GCCAATGTTA
CGTGAGCCAG ACTTTTTATG TGGTGGAAAT GTAGTCCCTG AACCTTTTTA TTTATCTGAT
CAAACACTTG TGACGCAAAT CATTTGTTAT GACTTGCGAT TTCCAGAGAT ATTGCGCTAT
CCAGCTAGAA AAGGTGCTAA AATTGCTTTT TATGTAGCGC AGTGGCCTAG CTCAAGACTA
GATCATTGGT TATCATTACT AAAAGCGAGA GCAATCGAAA ATGATATTTT TATTGTAGCT
TGTAATAGTT GTGGTGATGA TGGTCACACC AATTATGCTG GAAATTCAAT TGTCATTAAT
CCTAATGGTG AAATTTTAGA CCATTTAGAT GATAAAGAAG GAGTACTAAC AACACATATC
GATGTAGACT TAGTAGATCA ACAAAGAGAA TATATTCCAG TTTTCAGAAA TCTAAAACCA
CATCTTTATA AATAG
 
Protein sequence
MNILKIQILQ FNVERGNVDK NMQNIKTKFN QYLDKDTSVV VLPEMWNNGY ALEELEQKAD 
KNLKDSSLFI KDLAHTFNVD IIAGSVSNIR ENHIYNTAFA INKNKELINE YDKVHLVPML
REPDFLCGGN VVPEPFYLSD QTLVTQIICY DLRFPEILRY PARKGAKIAF YVAQWPSSRL
DHWLSLLKAR AIENDIFIVA CNSCGDDGHT NYAGNSIVIN PNGEILDHLD DKEGVLTTHI
DVDLVDQQRE YIPVFRNLKP HLYK