Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1488 |
Symbol | |
ID | 3241946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1556812 |
End bp | 1557606 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637168170 |
Product | carbon-nitrogen family hydrolase |
Protein accession | YP_189054 |
Protein GI | 57867367 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.810367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAATATAT TGAAAATCCA AATACTTCAA TTCAATGTAG AACGTGGAAA TGTTGATAAA AATATGCAAA ATATCAAAAC TAAGTTTAAT CAATACTTAG ATAAAGATAC CAGTGTCGTC GTGCTTCCAG AAATGTGGAA TAACGGTTAT GCATTAGAAG AATTAGAACA AAAAGCTGAT AAAAATCTTA AAGACAGCTC TCTCTTTATA AAAGACTTAG CACATACATT TAATGTAGAT ATCATTGCAG GTTCAGTGTC AAATATAAGA GAAAACCATA TATATAATAC TGCTTTTGCA ATTAATAAAA ACAAAGAATT GATTAATGAA TATGACAAAG TACATCTCGT GCCAATGTTA CGTGAGCCAG ACTTTTTATG TGGTGGAAAT GTAGTCCCTG AACCTTTTTA TTTATCTGAT CAAACACTTG TGACGCAAAT CATTTGTTAT GACTTGCGAT TTCCAGAGAT ATTGCGCTAT CCAGCTAGAA AAGGTGCTAA AATTGCTTTT TATGTAGCGC AGTGGCCTAG CTCAAGACTA GATCATTGGT TATCATTACT AAAAGCGAGA GCAATCGAAA ATGATATTTT TATTGTAGCT TGTAATAGTT GTGGTGATGA TGGTCACACC AATTATGCTG GAAATTCAAT TGTCATTAAT CCTAATGGTG AAATTTTAGA CCATTTAGAT GATAAAGAAG GAGTACTAAC AACACATATC GATGTAGACT TAGTAGATCA ACAAAGAGAA TATATTCCAG TTTTCAGAAA TCTAAAACCA CATCTTTATA AATAG
|
Protein sequence | MNILKIQILQ FNVERGNVDK NMQNIKTKFN QYLDKDTSVV VLPEMWNNGY ALEELEQKAD KNLKDSSLFI KDLAHTFNVD IIAGSVSNIR ENHIYNTAFA INKNKELINE YDKVHLVPML REPDFLCGGN VVPEPFYLSD QTLVTQIICY DLRFPEILRY PARKGAKIAF YVAQWPSSRL DHWLSLLKAR AIENDIFIVA CNSCGDDGHT NYAGNSIVIN PNGEILDHLD DKEGVLTTHI DVDLVDQQRE YIPVFRNLKP HLYK
|
| |