Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1472 |
Symbol | |
ID | 3241914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1537255 |
End bp | 1537800 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 637168155 |
Product | hypothetical protein |
Protein accession | YP_189039 |
Protein GI | 57867335 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000118375 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTAC ATTGTGCATA TGCTATATTA ATTAGAACAA GAGTGAAAGT GGTGACTCAG GTGCGAATTC AAAGTAGATG GTTAATATTC GCTATTTTTT TAACTGGAGC TATTTCTTTA TTGATAGGTT TGACTTATTA CAAAAGTATA AAATCTGTGG ATTTATCTGG TTACAGTGTG AATCAAATTA GTTTAAATCA TGGTTTTAAT CAAAAAGGAT TTGTGGTTAA TAAGAAAATT AAATTAGATA GATATACCTT TTACAATGAT AAAAATCATA AAGATTTTAC AGTAAAAGTA AAAAATAAAA CGCATAAGGT TAAAGGCATG GTTTTAGTCA AAGATGATAA AGTTGAAACA AATTTTGGTA TTAAAATGGG TGACCCAATT GATAAAGTCA TCAATAAATT GGGAGAAAAC TACAAGATTA ATAAAGTAGG GAAAAATTAT CACTCAATGA CTTATGTAGA CCGTTTTAAT AAATTAAAAT TAAACATTTT ATATAAAGAT AACATTGTTA AAAGAATTGA GTTCTTTAGT AAATAA
|
Protein sequence | MKLHCAYAIL IRTRVKVVTQ VRIQSRWLIF AIFLTGAISL LIGLTYYKSI KSVDLSGYSV NQISLNHGFN QKGFVVNKKI KLDRYTFYND KNHKDFTVKV KNKTHKVKGM VLVKDDKVET NFGIKMGDPI DKVINKLGEN YKINKVGKNY HSMTYVDRFN KLKLNILYKD NIVKRIEFFS K
|
| |