Gene SERP1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1366 
SymbolhemG 
ID3240837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1422508 
End bp1423956 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content34% 
IMG OID637168020 
Productprotoporphyrinogen oxidase 
Protein accessionYP_188935 
Protein GI57867290 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1232] Protoporphyrinogen oxidase 
TIGRFAM ID[TIGR00562] protoporphyrinogen oxidase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.409095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTATT TTAATAAATT TTTAAGCAAT TCTGAAAGGA AGCGTGGAAA AGTGAGTAAG 
AAAGTGGCAA TTATTGGAGC GGGAATCACT GGTTTATCTA GCGCATATTT CATTAAAAAA
CAAGACCCTT CTATTGAAGT AACTATCTTC GAAGCCTCAA ATAGAGTAGG TGGAAAGATT
CAAACATATA GATCAGATGG TTACACAATT GAGTTAGGCC CTGAGTCTTA TTTAGGTCGT
AAGACAATTA TGACTGATGT GGCAAAAGAT ATTGGATTAG AAAATGACCT TATAACAAAT
ACTACTGGCC AATCTTATAT TTTTGCTAAA AATAAATTAT ATCCTATTCC TGGTGGCTCA
ATTATGGGAA TTCCTACAGA TATTAAACCA TTTATTAAAA CAAGACTCAT TTCACCTATT
GGTAAATTAA GAGCGGGGCT TGATTTGTTT AAAAAACCGA TAGAAATTGA AGATGATATT
TCTGTTGGTA GTTTCTTTAG ACAACGATTA GGTAATGAAG TATTAGAGAA CTTAATTGAA
CCACTAATGG GTGGTATTTA TGGCACTGAT ATTGATCAAT TGAGCTTAAT GAGTACATTT
CCTAACTTTA AGGAAAAAGA GGAACAATTT GGTAGTTTGA TTAAAGGAAT GAAAGACGAA
AAAGAACAAC GTATTAAGAA ACGTCAATTA TATCCAGGTG CTCCTAAAGG ACAATTCAAA
CAGTTTAGAC ACGGATTGAG TTCTTTTATA GAGGCTCTTG TTAAAGATAT TGAAAGTAAA
GGTGTCCACA TACGATATAA CACGCCAGTC AAAGATATAT TGATTTCGCA AAAAGATTAT
GAAATTTTAT TAGAAGATGA CAGTAAAGAG AAATTTAATG GCTTACTTGT AACAACACCA
CATCAAGTAT TTCTGAACTG GTTTAGTCAC GATCCAGCAT TTGATTACTT TAAAAACATG
GATTCTACTA CTGTCGCAAC AGTTGTTTTG GCCTTTGATG AGAAAAATAT TACCAATACG
TACGATGGAA CTGGCTTTGT TATTGCAAGA ACAAGTCAAA CGGATATTAC TGCATGTACT
TGGACATCAA AGAAATGGCC ATTTACTACT CCAGAAGGTA AAGTTTTAAT TCGAGCATAT
ATAGGAAAAC CAGGTGATAC TGTAGTAGAT GATCACACCG ATGAAGAAAT AGTATCAATT
GTTAGAAAAG ACTTAAGCCA AATGATGACC ATCTCAGGGA ATCCTGATTT TACAATTGTA
AATCGGTTAC CTAAGAGTAT GCCCCAATAC CACGTGGGTC ATATTAAAAT GATTAAAGAA
ATTCAACAAC ATATTAAAAC AACTTATCCT AGATTACGTG TTACAGGGGC ACCGTTTGAA
GCTGTCGGTT TACCAGACTG CATACAACAA GGTAAGAATG CAGTTGATGA AATATTAGAA
GAGTTATAA
 
Protein sequence
MAYFNKFLSN SERKRGKVSK KVAIIGAGIT GLSSAYFIKK QDPSIEVTIF EASNRVGGKI 
QTYRSDGYTI ELGPESYLGR KTIMTDVAKD IGLENDLITN TTGQSYIFAK NKLYPIPGGS
IMGIPTDIKP FIKTRLISPI GKLRAGLDLF KKPIEIEDDI SVGSFFRQRL GNEVLENLIE
PLMGGIYGTD IDQLSLMSTF PNFKEKEEQF GSLIKGMKDE KEQRIKKRQL YPGAPKGQFK
QFRHGLSSFI EALVKDIESK GVHIRYNTPV KDILISQKDY EILLEDDSKE KFNGLLVTTP
HQVFLNWFSH DPAFDYFKNM DSTTVATVVL AFDEKNITNT YDGTGFVIAR TSQTDITACT
WTSKKWPFTT PEGKVLIRAY IGKPGDTVVD DHTDEEIVSI VRKDLSQMMT ISGNPDFTIV
NRLPKSMPQY HVGHIKMIKE IQQHIKTTYP RLRVTGAPFE AVGLPDCIQQ GKNAVDEILE
EL