Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1329 |
Symbol | |
ID | 3241716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1390222 |
End bp | 1391706 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637167978 |
Product | hypothetical protein |
Protein accession | YP_188901 |
Protein GI | 57867219 |
COG category | [S] Function unknown |
COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.230961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGTAG CAATAATAGG TATGGGAACA GCTGGTGTAA GTGTGTTACG CCAACTCGTT AAACATGAAA ACTTTTCTCA ATTAAAAGTA GATGTATATG ACGATGATAG AAATATGGGC CAAGGTGTTC CATTTCAAAA TGATAGTAGC GAACTACTTA TTAACATGCC ATCAAAATCC ATGAGCTTAA ATCTTGATGA TGATCAAGAG TTTTGGAAGT GGTATCAAAA TCAGACGGAA TTTAATTTTA GTAATCCTCA ATATTTGCCT AGATTTGTAT TTGGTCATTA TATGAAGTCT TATTTATCTT ATTATAATGA CCAATTTGAT AATTTAACTA TTATCAATGA TAAAGTACAA GAAATTTTTA CACAATCCGA TGTTGATGAC ACAGATTTAA AATATCATGT ATGTACATGT GATGATGAAA AAGAATGGCG TGAATACGAT TATTTATTTT TAACTTTTGG AACTTTTAGT TACCATGACC CTTATGATTT GAAGGGAACT AAAGGCTATA TACAAACGCC GTATCCTACA TATCATACAC TTGATAATGT TAAAGATTCA GATCGAATCG TGATTATTGG AACAGGGTTG GCTAGTTTAG ATGCTGTGAG ATATGTAGCT GCACATCATC CATCTTTACC CATTACTATG ACAAGTCGTT CTGCAGCATT GCCAAGTGTT AGAGGGAAAA TGACTAAAAT TCAGTTTACG CATTTAACTA AATCACGATT TAATGGAATT ATGAAAAATC ACTTTGGTAA TGTACCATTA GAAAAAGTAG TTTCATTATT TTTAAAAGAA TGTGAAGATT ATGGAATAGA TTTTAAAAAA CTTATTTATC GTAGAACCGG AAACCATGTC AAAGACTTGG AGTATGATTT AAATCATGAA GAAGAAATGG GGATATTCCA AAGTATCATT GAACATTTAA AAGAAAATTT AAACTGGATT TGGAATAGTT TGAGCGTTAA AGATCAAGAA ACTTTTAATC GTAAATACAC TAAAATTATT CAGTTAAATT CTAATCCAAT GCCTCCTAGA ACAGCTCGTT TACTTATCAA GTTAATACAG AATAATGAAC TTGTCATTAA GAAAGGGCTA GAAGACATAG TCCATAAAAA TAATCAATTT ATGTTGAAGT ATAACGACAC TACGCAAAAT TATGAGTTGT TTGACATCGT TATTAATGCA ACGGGCTCTA AAACACATCT TTCTCAATTA GATGAGGATG ATCAATTAAT TTTAAACTTA GAAAATAGAC AAATTGTTCA ACGTCATCCT ATGGGTGGCA TTCAAATTAT CCCAGAAACA AATCAAGTCA TAAGCCCTAG ATATGGAACC TTAAAAAATG TGATTGCAAT TGGACAAATG ACCAACGGTG TCAATAAACT TAGAAATGGC GTAAAGATGA TTGTTAATCA AGTTGTTGAT ACAGTATCTC AATTATATAT AACACAGGAA AATAGAAATA AGTAA
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Protein sequence | MRVAIIGMGT AGVSVLRQLV KHENFSQLKV DVYDDDRNMG QGVPFQNDSS ELLINMPSKS MSLNLDDDQE FWKWYQNQTE FNFSNPQYLP RFVFGHYMKS YLSYYNDQFD NLTIINDKVQ EIFTQSDVDD TDLKYHVCTC DDEKEWREYD YLFLTFGTFS YHDPYDLKGT KGYIQTPYPT YHTLDNVKDS DRIVIIGTGL ASLDAVRYVA AHHPSLPITM TSRSAALPSV RGKMTKIQFT HLTKSRFNGI MKNHFGNVPL EKVVSLFLKE CEDYGIDFKK LIYRRTGNHV KDLEYDLNHE EEMGIFQSII EHLKENLNWI WNSLSVKDQE TFNRKYTKII QLNSNPMPPR TARLLIKLIQ NNELVIKKGL EDIVHKNNQF MLKYNDTTQN YELFDIVINA TGSKTHLSQL DEDDQLILNL ENRQIVQRHP MGGIQIIPET NQVISPRYGT LKNVIAIGQM TNGVNKLRNG VKMIVNQVVD TVSQLYITQE NRNK
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