Gene SERP1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1287 
Symbol 
ID3241425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1330620 
End bp1331783 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content34% 
IMG OID637167936 
Productaminotransferase, class V 
Protein accessionYP_188859 
Protein GI57867244 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.17916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTATT ACCAACCTTT ATTATTAACA CCTGGACCAA CTCCTGTACC GGAACAAATC 
TTGAGTGCCG TACAATTACC AATGGTAGGT CATCGTTCTA CTGACTTTGA GGAAATTGCT
AGTGAAGCAT TTAAAGGTTT AAAGCCAGTA TTTGGTAGCA AAAACGAAGT ACTTATTCTT
ACATCTAGTG GCACTAGCGT ATTAGAAGCA AGTATGCTTA ACATCGCGAA TCCTGACGAT
CATATTGTGA TAATTGTTTC TGGTGCATTT GGAAATCGCT TTAAACAAAT CGCACAAACT
TATTATAATC ATGTACATGT ATATGATGTT AACTGGGGTG AAGCTGTAAT AGTTGATGAC
TTTATCACTT ATTTAAAGCA ATTAAACGTT CCAGTCACTG CAGTATTCAC TCAATTTTGT
GAAACATCTA CTGGTGTCAT ACATCCAGTT CACCAATTAG GTCATGCACT TAAAGCTTTT
GATAATTCCT TATATTTTAT TGTTGATGGT GTAAGCTGTA TCGGTGCAGT GGATGTTGAT
TTAACAAAAG ATAAAATCGA TGTATTAGTT TCGGGAAGTC AAAAAGCTAT CATGCTACCA
CCAGGTCTAG CATTTGTTGC TTATAGCGAT AGAGCAAAAA AACGATTTGC TGATGTAAAA
ACACCGAGAT TCTATTTAGA TTTAAATAAA TACATAAAAT CACAAGAGCA AAATTCAACG
CCCTTCACCC CTAATGTTGG TCTATTTAGA GGAATAAATG CTTATGTAGA ACTTGTAAAA
AAAGAAGGAT TAAATCACGT TATTTCACGC CATTTTAAAA TACGTAATGC CTTAAGAGCA
GCACTAAAGG CACTTGAATT AGAATTATTA GTAAAAGATG ATGCTCATGC CTCACCTACT
GTGACCTCAT TTGTTCCAAA AAATCAAGAA GAACTTAATA TCATTAAAAA TCAACTTAAA
TCTCAATTCA ATATAACTAT TGCTGGGGGA CAAGGACACT TAAAAGGACA AATTTTGAGA
ATTGGTCACA TGGGGAAAAT ATCTCCTTTT GATATTTTAG CAGTCGTGTC TGCATTGGAA
ATTATTTTAA CTTCTAATAG AAATGTCAAT TATATTGGAA CAGGGATAAC TCAATTTATG
GAGGTTATTA GACATGAGTC ATAA
 
Protein sequence
MQYYQPLLLT PGPTPVPEQI LSAVQLPMVG HRSTDFEEIA SEAFKGLKPV FGSKNEVLIL 
TSSGTSVLEA SMLNIANPDD HIVIIVSGAF GNRFKQIAQT YYNHVHVYDV NWGEAVIVDD
FITYLKQLNV PVTAVFTQFC ETSTGVIHPV HQLGHALKAF DNSLYFIVDG VSCIGAVDVD
LTKDKIDVLV SGSQKAIMLP PGLAFVAYSD RAKKRFADVK TPRFYLDLNK YIKSQEQNST
PFTPNVGLFR GINAYVELVK KEGLNHVISR HFKIRNALRA ALKALELELL VKDDAHASPT
VTSFVPKNQE ELNIIKNQLK SQFNITIAGG QGHLKGQILR IGHMGKISPF DILAVVSALE
IILTSNRNVN YIGTGITQFM EVIRHES