Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1287 |
Symbol | |
ID | 3241425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1330620 |
End bp | 1331783 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167936 |
Product | aminotransferase, class V |
Protein accession | YP_188859 |
Protein GI | 57867244 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.17916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTATT ACCAACCTTT ATTATTAACA CCTGGACCAA CTCCTGTACC GGAACAAATC TTGAGTGCCG TACAATTACC AATGGTAGGT CATCGTTCTA CTGACTTTGA GGAAATTGCT AGTGAAGCAT TTAAAGGTTT AAAGCCAGTA TTTGGTAGCA AAAACGAAGT ACTTATTCTT ACATCTAGTG GCACTAGCGT ATTAGAAGCA AGTATGCTTA ACATCGCGAA TCCTGACGAT CATATTGTGA TAATTGTTTC TGGTGCATTT GGAAATCGCT TTAAACAAAT CGCACAAACT TATTATAATC ATGTACATGT ATATGATGTT AACTGGGGTG AAGCTGTAAT AGTTGATGAC TTTATCACTT ATTTAAAGCA ATTAAACGTT CCAGTCACTG CAGTATTCAC TCAATTTTGT GAAACATCTA CTGGTGTCAT ACATCCAGTT CACCAATTAG GTCATGCACT TAAAGCTTTT GATAATTCCT TATATTTTAT TGTTGATGGT GTAAGCTGTA TCGGTGCAGT GGATGTTGAT TTAACAAAAG ATAAAATCGA TGTATTAGTT TCGGGAAGTC AAAAAGCTAT CATGCTACCA CCAGGTCTAG CATTTGTTGC TTATAGCGAT AGAGCAAAAA AACGATTTGC TGATGTAAAA ACACCGAGAT TCTATTTAGA TTTAAATAAA TACATAAAAT CACAAGAGCA AAATTCAACG CCCTTCACCC CTAATGTTGG TCTATTTAGA GGAATAAATG CTTATGTAGA ACTTGTAAAA AAAGAAGGAT TAAATCACGT TATTTCACGC CATTTTAAAA TACGTAATGC CTTAAGAGCA GCACTAAAGG CACTTGAATT AGAATTATTA GTAAAAGATG ATGCTCATGC CTCACCTACT GTGACCTCAT TTGTTCCAAA AAATCAAGAA GAACTTAATA TCATTAAAAA TCAACTTAAA TCTCAATTCA ATATAACTAT TGCTGGGGGA CAAGGACACT TAAAAGGACA AATTTTGAGA ATTGGTCACA TGGGGAAAAT ATCTCCTTTT GATATTTTAG CAGTCGTGTC TGCATTGGAA ATTATTTTAA CTTCTAATAG AAATGTCAAT TATATTGGAA CAGGGATAAC TCAATTTATG GAGGTTATTA GACATGAGTC ATAA
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Protein sequence | MQYYQPLLLT PGPTPVPEQI LSAVQLPMVG HRSTDFEEIA SEAFKGLKPV FGSKNEVLIL TSSGTSVLEA SMLNIANPDD HIVIIVSGAF GNRFKQIAQT YYNHVHVYDV NWGEAVIVDD FITYLKQLNV PVTAVFTQFC ETSTGVIHPV HQLGHALKAF DNSLYFIVDG VSCIGAVDVD LTKDKIDVLV SGSQKAIMLP PGLAFVAYSD RAKKRFADVK TPRFYLDLNK YIKSQEQNST PFTPNVGLFR GINAYVELVK KEGLNHVISR HFKIRNALRA ALKALELELL VKDDAHASPT VTSFVPKNQE ELNIIKNQLK SQFNITIAGG QGHLKGQILR IGHMGKISPF DILAVVSALE IILTSNRNVN YIGTGITQFM EVIRHES
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