Gene SERP1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1279 
SymbolthiI 
ID3241725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1323145 
End bp1324368 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content32% 
IMG OID637167928 
Productthiamine biosynthesis protein ThiI 
Protein accessionYP_188851 
Protein GI57867227 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0301] Thiamine biosynthesis ATP pyrophosphatase 
TIGRFAM ID[TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0186014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATATG ATCATTTATT AGTTAGATAT GGAGAGCTTA CGCTTAAAGG TACGAATAGA 
AAAATGTTTG TTAATCAACT TAAAGATAAT GTGAAACGCG CGCTTATTCC ATTAAGTGGT
TATCATGTCA AAGGAAAGAG GGATAGAATG TACATAGAAT TATCCCCTGA AGCAGACATA
AATGAAATCA TTCAACGCTT ATCTAAAGTT TATGGTATAA AATCAATTAG TCCAGTTATA
AAAATTGATA AAAACGAAGA GAAAATTAAT CAATCAGCAA TACAGTTATC TCATGACTTT
GAAAAAGGTT CAACTTTTAA GGTTGATGTA AAACGCGTTG ACAAGTCATT TCGATTGGAT
ACGTACGAAT TGCAACGTCA AGTCGGTGGA GCAATACTAA AAGAAAATAA TAATATAACA
GTGAATGTTA AAAATCCTGA CTATGAAATT AAAATAGAAG TAAGAATGGA TGCTATTTAT
ATTTATGAAA AAGTAATCGC TGGTGCAGGT GGACTGCCAG TCGGTACAGG TGGTAAGACA
TTACTTATGT TAAGTGGTGG TATTGATTCT CCTGTAGCGG GAATAGAAGT AATGAAACGT
GGTGTAACTG TTGAAGCAAT ACATTTTCAT AGTCCACCGT TTACGAGCGA AAAAGCCAAA
GATAAAGTTA TCGAATTAAC AAGAATTCTA GCGGAACGTG TTGGTCCTAT CAAATTGCAT
CTCGTGCCAT TTACAGAAAT ACAAAAGCAA ATTAATAAAG TTGTACATCC TCGTTATACG
ATGACTTCTA CAAGAAGAAT GATGATGCGT ATATCTGATA AAGTTGTACA TCAAATAAAT
GCTAATGCTA TCGTAAATGG AGAGAATCTT GGTCAAGTAG CAAGTCAGAC GCTAAAGAGT
ATGTACGCTA TTAATCATGT TACAGCTACA CCTGTTTTAA GACCTCTATT AACGTTAGAT
AAAGAAGACA TTATTAAGAA AGCGAAAGAA CTTGGTACAT TTGAAACATC TATTCAACCC
TATGAAGATT GTTGTACAAT ATTTACTCCG AAAAATCCTG TAACTGAACC GGACTTTGAC
AAAGTAATAA AATATGAAAG TGTATTTAAT TTTGATGAAA TGATAGAAAA TGCAGTTGAA
AATATTGAAA CATTAACAAT AGATCAAAAT TATAAAAGTG CGAAAGAACA ATCTACAGAT
TCATTGATTA AAGATTTATT CTAA
 
Protein sequence
MQYDHLLVRY GELTLKGTNR KMFVNQLKDN VKRALIPLSG YHVKGKRDRM YIELSPEADI 
NEIIQRLSKV YGIKSISPVI KIDKNEEKIN QSAIQLSHDF EKGSTFKVDV KRVDKSFRLD
TYELQRQVGG AILKENNNIT VNVKNPDYEI KIEVRMDAIY IYEKVIAGAG GLPVGTGGKT
LLMLSGGIDS PVAGIEVMKR GVTVEAIHFH SPPFTSEKAK DKVIELTRIL AERVGPIKLH
LVPFTEIQKQ INKVVHPRYT MTSTRRMMMR ISDKVVHQIN ANAIVNGENL GQVASQTLKS
MYAINHVTAT PVLRPLLTLD KEDIIKKAKE LGTFETSIQP YEDCCTIFTP KNPVTEPDFD
KVIKYESVFN FDEMIENAVE NIETLTIDQN YKSAKEQSTD SLIKDLF