Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1279 |
Symbol | thiI |
ID | 3241725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1323145 |
End bp | 1324368 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637167928 |
Product | thiamine biosynthesis protein ThiI |
Protein accession | YP_188851 |
Protein GI | 57867227 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0186014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATATG ATCATTTATT AGTTAGATAT GGAGAGCTTA CGCTTAAAGG TACGAATAGA AAAATGTTTG TTAATCAACT TAAAGATAAT GTGAAACGCG CGCTTATTCC ATTAAGTGGT TATCATGTCA AAGGAAAGAG GGATAGAATG TACATAGAAT TATCCCCTGA AGCAGACATA AATGAAATCA TTCAACGCTT ATCTAAAGTT TATGGTATAA AATCAATTAG TCCAGTTATA AAAATTGATA AAAACGAAGA GAAAATTAAT CAATCAGCAA TACAGTTATC TCATGACTTT GAAAAAGGTT CAACTTTTAA GGTTGATGTA AAACGCGTTG ACAAGTCATT TCGATTGGAT ACGTACGAAT TGCAACGTCA AGTCGGTGGA GCAATACTAA AAGAAAATAA TAATATAACA GTGAATGTTA AAAATCCTGA CTATGAAATT AAAATAGAAG TAAGAATGGA TGCTATTTAT ATTTATGAAA AAGTAATCGC TGGTGCAGGT GGACTGCCAG TCGGTACAGG TGGTAAGACA TTACTTATGT TAAGTGGTGG TATTGATTCT CCTGTAGCGG GAATAGAAGT AATGAAACGT GGTGTAACTG TTGAAGCAAT ACATTTTCAT AGTCCACCGT TTACGAGCGA AAAAGCCAAA GATAAAGTTA TCGAATTAAC AAGAATTCTA GCGGAACGTG TTGGTCCTAT CAAATTGCAT CTCGTGCCAT TTACAGAAAT ACAAAAGCAA ATTAATAAAG TTGTACATCC TCGTTATACG ATGACTTCTA CAAGAAGAAT GATGATGCGT ATATCTGATA AAGTTGTACA TCAAATAAAT GCTAATGCTA TCGTAAATGG AGAGAATCTT GGTCAAGTAG CAAGTCAGAC GCTAAAGAGT ATGTACGCTA TTAATCATGT TACAGCTACA CCTGTTTTAA GACCTCTATT AACGTTAGAT AAAGAAGACA TTATTAAGAA AGCGAAAGAA CTTGGTACAT TTGAAACATC TATTCAACCC TATGAAGATT GTTGTACAAT ATTTACTCCG AAAAATCCTG TAACTGAACC GGACTTTGAC AAAGTAATAA AATATGAAAG TGTATTTAAT TTTGATGAAA TGATAGAAAA TGCAGTTGAA AATATTGAAA CATTAACAAT AGATCAAAAT TATAAAAGTG CGAAAGAACA ATCTACAGAT TCATTGATTA AAGATTTATT CTAA
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Protein sequence | MQYDHLLVRY GELTLKGTNR KMFVNQLKDN VKRALIPLSG YHVKGKRDRM YIELSPEADI NEIIQRLSKV YGIKSISPVI KIDKNEEKIN QSAIQLSHDF EKGSTFKVDV KRVDKSFRLD TYELQRQVGG AILKENNNIT VNVKNPDYEI KIEVRMDAIY IYEKVIAGAG GLPVGTGGKT LLMLSGGIDS PVAGIEVMKR GVTVEAIHFH SPPFTSEKAK DKVIELTRIL AERVGPIKLH LVPFTEIQKQ INKVVHPRYT MTSTRRMMMR ISDKVVHQIN ANAIVNGENL GQVASQTLKS MYAINHVTAT PVLRPLLTLD KEDIIKKAKE LGTFETSIQP YEDCCTIFTP KNPVTEPDFD KVIKYESVFN FDEMIENAVE NIETLTIDQN YKSAKEQSTD SLIKDLF
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