Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1213 |
Symbol | mreC |
ID | 3241109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1249317 |
End bp | 1250156 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637167865 |
Product | rod shape-determining protein MreC |
Protein accession | YP_188788 |
Protein GI | 57867160 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000151101 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTAAGT TTTTTAGAAA TAACAAGCTC ATTGTCGTTT TATGTGCAAT GATTATTTTT ATTGCATTAA TAGGGTTATC GATACGTTCT CAGACCCAAT CTCCAGCTGA ACAATACGTA GGAGACTCTG TATCATTTGG ACAAAGAGTA ATCAGTTATC CAATTCAATT TGTTACTGGA TCTATTGGTG ATTTATTTGA AAAAGGAAGC TCAAAAAAGG ATAAAAATAA AATCAAACAA CTTGAAGCTA AAAATGAAGA GTTAGAATCA GAAAATAAGA AATATAAAAA AGAACTTGAT ATCAAAGATT TATCAAAATA TGAACCTATT TCTACTTCAG TTATTGCGAG AAACCCAGAT CAATGGATGA ATACGATATT AATAGATAAG GGCTCCAAAG CAGGTATAAA AAATAATATG GCCGTCATGA CAACAGAAGG ATTAGTTGGA AGAGTAACCA AAGTTAATCA GTTTTCATCA CAAGTAGACC TTATTTCCAC TCATACTCGA GCAGGAAAAT TATCTGTTAA TATTCATCAC GGTACTAAGA ATATTTTTGG TTTAATCGAT CGATACGACA ATAAAAACGA AGAATTGATC ATAAGTGATA TTAATAACAA AGATAGCGTT AAAAAAGGCG ATAAAGTAGT AACAAGTGGA TTAGCAGATC AAATACCGAG TGGGTTATAT ATTGGTGAAG TAACAAAAGT CGAAAATGAT CAATATGGGC TTGCTAAACA AGTACGGGTC AAAACTGGAG CTGATATGAC AGATTTAACT CATGTGTATG TTGCTAAACG TGATGTCAGT ACTATACCTG ATGAAGGTAG TGATAATTAA
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Protein sequence | MLKFFRNNKL IVVLCAMIIF IALIGLSIRS QTQSPAEQYV GDSVSFGQRV ISYPIQFVTG SIGDLFEKGS SKKDKNKIKQ LEAKNEELES ENKKYKKELD IKDLSKYEPI STSVIARNPD QWMNTILIDK GSKAGIKNNM AVMTTEGLVG RVTKVNQFSS QVDLISTHTR AGKLSVNIHH GTKNIFGLID RYDNKNEELI ISDINNKDSV KKGDKVVTSG LADQIPSGLY IGEVTKVEND QYGLAKQVRV KTGADMTDLT HVYVAKRDVS TIPDEGSDN
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