Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1193 |
Symbol | hisS |
ID | 3241828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1229867 |
End bp | 1231141 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637167846 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_188769 |
Protein GI | 57867126 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000346938 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGA TGCCAAGAGG TACCCAAGAT ATCTTGCCGC AAGATTCTGC TAAATGGCGT TACATTGAAA ATCGATTACA CACATTAATG GAATTGTATA ATTATAAAGA AATAAGAACG CCAATTTTTG AAAGTACTGA ACTTTTTGCA AGAGGCGTGG GGGATTCTAC TGACGTTGTT CAAAAGGAAA TGTATACATT TAAAGATAAA GGGGATCGTA GTTTAACATT ACGTCCTGAA GGAACTGCAG CCGTTGTACG TTCATATATT GAACACAAAA TGCAAGGTGA ACCCAATCAA CCTATCAAAC TTTACTACAA TGGTCCTATG TTTAGATACG AACGTAAACA AAAAGGAAGA TATCGCCAAT TTAACCAATT TGGTGTCGAA GCAATAGGAG CGGAAAATCC TAGTATTGAT GCTGAAATAC TCGCTATGGT TATGCATATA TATGAGTCTT TCGGATTAAA GCATTTAAAG TTAGTTATCA ATAGTATTGG TGATAGTGAA TCACGTAAAG AATATAACGA AGCATTAGTA AAACATTTTG AACCTGTGAT TGATACATTT TGTTCAGATT GTCAATCAAG ATTACACACT AATCCTATGA GAATTTTAGA TTGTAAAATC GATAGAGATA AAGAAGCAGT AAAAAATGCA CCCCGTATCA CAGATTATCT CAATAATGAT TCTAAATCTT ATTATGAACA AGTTAAATTA CATCTTGATA ATTTGAACAT ATCTTATGTT GAAGATCCTA ACTTAGTTCG TGGGTTAGAT TATTATACTC ATACTGCCTT TGAATTAATG ATTGATAATC CAGAGTATGA TGGAGCTATC ACTACATTAT GTGGTGGTGG TCGATATAAT GGGTTGTTAC AATTATTAGA TGGTCCAGAT GAAACAGGTA TTGGGTTTGC ACTAAGTATT GAAAGATTAT TGATGGCACT TGATGAAGAA GGTATTTCAT TAGATGTAAG TGAAGATTTT GATTTATTTG TTGTGACAAT GGGAGAAGAT GCCGATCGTT ATGCTGTTAA GTTAATCAAT GATTTAAGAA GAAATGGAAT AAAAGTAGAT AAGGATTATC TAAACAGAAA AATTAAAGGA CAAATGAAAC AAGCTGACCG TCTTAATGCT AAATATACAG TAGTAATTGG AGATCAAGAG CTTGAAAATA ATGAAATTGG TGTGAAAAAC ATGATTTCAG GCGAATCAGA AAATGTACAA TTAGACGAAT TGGTTAATTA TTTTAAAAGT AGAAAGGAAG TCTAA
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Protein sequence | MIKMPRGTQD ILPQDSAKWR YIENRLHTLM ELYNYKEIRT PIFESTELFA RGVGDSTDVV QKEMYTFKDK GDRSLTLRPE GTAAVVRSYI EHKMQGEPNQ PIKLYYNGPM FRYERKQKGR YRQFNQFGVE AIGAENPSID AEILAMVMHI YESFGLKHLK LVINSIGDSE SRKEYNEALV KHFEPVIDTF CSDCQSRLHT NPMRILDCKI DRDKEAVKNA PRITDYLNND SKSYYEQVKL HLDNLNISYV EDPNLVRGLD YYTHTAFELM IDNPEYDGAI TTLCGGGRYN GLLQLLDGPD ETGIGFALSI ERLLMALDEE GISLDVSEDF DLFVVTMGED ADRYAVKLIN DLRRNGIKVD KDYLNRKIKG QMKQADRLNA KYTVVIGDQE LENNEIGVKN MISGESENVQ LDELVNYFKS RKEV
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