Gene SERP1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1185 
SymbolmnmA 
ID3241814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1220766 
End bp1221884 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content34% 
IMG OID637167838 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_188761 
Protein GI57867112 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTAACA AAGATATACG CGTAGTTGTG GGCATGTCTG GTGGAGTGGA TAGCTCTGTT 
ACTGCATACT TGTTAAAAGA ACAAGGTTAT GATGTAATAG GTATATTTAT GAAAAATTGG 
GACGATACTG ATGAAAATGG GGTGTGTACA GCCACTGAGG ATTATAATGA CGTGATTGCA 
GTATGTAATC AAATTGGCAT CCCATACTAC GCTGTTAATT TTGAAGAACA GTATTGGGAT 
AAAGTATTTA CTTATTTTCT TGATGAATAT AAAAAAGGTC GTACACCTAA CCCTGATGTG 
ATGTGTAATA AAGAAATTAA ATTTAAAGCA TTTTTAGAAC ATGCTTTAAA ATTAGGCGCT 
GATTATGTCG CTACAGGTCA TTATGCTCGT ATACGTCGTC ATGATGATGG GCATGTTGAA 
ATGCTAAGAG GTGTTGACAA TAATAAAGAC CAAACCTACT TTTTAAATCA ATTATCCCAA 
GAACAACTAT CCAAAGTCAT GTTCCCAATT GGAGATATTG AAAAAAGTGA AGTAAGACGT 
ATTGCAGAAG AGCAAAATTT AGCTACTGCC AAGAAAAAAG ACTCAACAGG TATTTGTTTT 
ATTGGTGAAA GAAACTTTAA AGAATTTTTA TCACATTACC TACCAGCTCA ATCTGGTGAA 
ATGTTGACAT TAAATGGAAA AAAAATGGGA CAGCATAGTG GATTGATGTA TTATACAATT 
GGTCAACGTC ACGGCTTAGG CATCGGTGGA GATGGAGATC CATGGTTTGT TGTAGGTAAA 
AATTTAAATG ATAACGTATT ATATGTTGAA CAGGGATTTC ACCATGATGC ACTTTATAGT 
GATTATCTCA TAGCTTCTGA TTATTCATTT GTTAATCCAA GTGAAATTGA TTTGGAAAAA 
GGTTTTGAAT GTACAGCTAA ATTCCGTTAT CGCCAAAAAG ATACTAAAGT TTATGTTCAA 
CGCGAAAACG AGAATTCTAT TAGAGTAACT TTTGCTGAAC CAGTTAGAGC GATTACACCT 
GGTCAAGCAG TTGTCTTCTA TAATCAAGAA GTATGTTTAG GTGGCGCTAC AATTGATGAT 
GTTTATAAAA ACGAAGGTCA ATTAAGTTAC GTTGTATAA
 
Protein sequence
MSNKDIRVVV GMSGGVDSSV TAYLLKEQGY DVIGIFMKNW DDTDENGVCT ATEDYNDVIA 
VCNQIGIPYY AVNFEEQYWD KVFTYFLDEY KKGRTPNPDV MCNKEIKFKA FLEHALKLGA 
DYVATGHYAR IRRHDDGHVE MLRGVDNNKD QTYFLNQLSQ EQLSKVMFPI GDIEKSEVRR 
IAEEQNLATA KKKDSTGICF IGERNFKEFL SHYLPAQSGE MLTLNGKKMG QHSGLMYYTI 
GQRHGLGIGG DGDPWFVVGK NLNDNVLYVE QGFHHDALYS DYLIASDYSF VNPSEIDLEK 
GFECTAKFRY RQKDTKVYVQ RENENSIRVT FAEPVRAITP GQAVVFYNQE VCLGGATIDD 
VYKNEGQLSY VV