| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1168 |
|---|
| Symbol | |
|---|
| ID | 3242893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1203466 |
|---|
| End bp | 1204224 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637167821 |
|---|
| Product | LamB/YcsF family protein |
|---|
| Protein accession | YP_188744 |
|---|
| Protein GI | 57867079 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.810933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTGA AAATTGATTT AAATTGTGAT TTAGGAGAAG CTTTTGGTAA CTATACATTC
GGTGGAGATC AGCACATTTT ACCATTAATA ACTTCTGCTA ATATTGCTTG TGGTTATCAT
GCAGGTGATG AAGATGTTAT GAATGAAACT GTTCAATTAG CGAAAAAAAA TAATATAAGT
ATTGGAGCAC ATCCGGGTCT TCCTGATTTG AAAGGCTTTG GTCGTCGTAA AATGGATCTT
ACTCCAAATG AAATTTATAA CTTAGTTATA TATCAATTAG GTGCGTTAAG TGGCTTTTGT
AAAATCAATC ATGTAAAAAT GATGCATGTT AAACCTCATG GTGCCCTTTA TCAAATGGGG
GCTAGAAATA AAGAAATTGC ACATGCAATT GCTCAAGCAG TTTTTGATTT CGACTCAAAT
CTAATTTTCG TCGGCTTAGC GAATACATTA CTTATTTCGG AAGCTGAATT AGTGGGGCTT
AAGGTAGCTT CGGAAGTATT TGCTGACCGT CGTTATGAAG ATGACGGACA ATTGGTAAGT
AGAAAAAAAA CCGATGCCAC TATCACTAAT ACTGACGAAG CAATCCAACA AGCATTAAAA
ATGGTTTTGG AAAATAAAGT TGTAAGTAAA AATGGAAAAA TCATCGATTT GAAAGCTGAT
ACAATTTGTG TTCACGGAGA TGGAAAACAC GCATTAGAAT TTGTTACGCA AATTAGAAAT
GAATTAATGA AAGAAGGCAT TGATATTCAA TCCTTATAG
|
|---|
| Protein sequence | MKLKIDLNCD LGEAFGNYTF GGDQHILPLI TSANIACGYH AGDEDVMNET VQLAKKNNIS
IGAHPGLPDL KGFGRRKMDL TPNEIYNLVI YQLGALSGFC KINHVKMMHV KPHGALYQMG
ARNKEIAHAI AQAVFDFDSN LIFVGLANTL LISEAELVGL KVASEVFADR RYEDDGQLVS
RKKTDATITN TDEAIQQALK MVLENKVVSK NGKIIDLKAD TICVHGDGKH ALEFVTQIRN
ELMKEGIDIQ SL
|
|---|
| |