| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1128 |
|---|
| Symbol | dnaG |
|---|
| ID | 3242917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1167172 |
|---|
| End bp | 1168968 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637167781 |
|---|
| Product | DNA primase |
|---|
| Protein accession | YP_188704 |
|---|
| Protein GI | 57867103 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0358] DNA primase (bacterial type) |
|---|
| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0012752 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGTATAG ATCAATCCGT CATTGATGAA ATAAAAAATA AAACTGATAT ATTAGATTTA
GTTAGTGAAT ATGTAAAACT TGAAAAAAGA GGACGCAATT ATATCGGTTT GTGTCCTTTT
CATGATGAAA AAACACCCTC ATTTACAGTT TCAGAAGATA AACAAATTTG TCATTGTTTT
GGATGTAAAA AAGGTGGTAA TGTTTTTCAA TTTACGCAAG AAATTAAAGA CGTATCATTT
GTTGAAGCTG TAAAGGACTT GGGTGAACGA GTTAATATTC AAGTTGATAT CGGGCAGAAC
CAAACAAATT CCTCGACAAA AATTGCGTCT GATGAGTTGA AAATGATTGA GATGCATGAA
CTCATTAAAG ATTATTATCA TTATGCTTTA ATGAAAACAG TTGAAGGTGA GGAAGCCCTA
AATTATTTAC ATGAACGCGG CTTTACGGAT GACCTTATTA AAGAAAGAGA AATTGGATAT
GCACCTGATA ACTCACATTT TTGTCATGAT TTTCTTGAAA AAAAAGGATA TGATATAGAA
CTAGCATTTG AAGCGGGTTT GTTATCTCGT AATGAAGAGA ATTTCACATA TTTTGATAGA
TTTAGAAATA GAATTATGTT TCCATTAAAG AATGGACAAG GACGAATTGT TGGGTATTCA
GGACGGACAT ATACTGATCA AGAACCAAAA TATTTAAATA GTCCAGAAAC ACCTATTTTC
CAGAAGCGTA GAATTTTATA TAATTTAAAT AAAGCACGTA AATTTATTCG AAAGCAAGAT
GAAATTATTT TATTAGAAGG TTTCATGGAT GTAATTAAAT CAGATTATGC TGGTTTAAAA
CAAGTTGTCG CTAGTATGGG TACACAGTTA TCACAAGAAC ATATTACTTT TTTACAAAAA
CTAACGCAAA ATGTAACATT AATGTTTGAT GGTGATTATG CTGGTAAAGA AGCTACTCTA
AAAACTGGAC AAGCACTGTT GAATCAAGGC TTAAATGTGT ATGTGGTTCA ACTACCTTCA
GGTATGGATC CTGATGACTA TATTAGAAAA TATGATAACG AACAATTCTT AAAATTTGTT
CAACAAGACA AACAATCATT TGTGCTATTT AAAGTTAAAA TGTATCAAAA TGAGATTAAT
CATAATGATC TTGCATACGA AAAACATTTT AAAGAAACTG TGCGAGACCT TTCTTTAGTC
AATTCAGGTA TCATTCGTAA TAAACTTATT CAAAACATAG CTGATATATT TAAAGTTAAT
CCAGAAACCA TTCAATATGA GTTAGATGCA ACTTATCAAC ATCAGATGTC GTCGAACACT
TATCCCACTT TTCAAGATGA GCCAAGCAAA CAACAATTAA TACTCGGTCG TCTGACTAAA
AATGAGAAAG CAGAAAGAGC TTTAATTAAG CATTTAACGA AAGATAAAGA TACTTTTTTG
AATTATTATC AAAAAATTGT GCCAGAAGAC TTTACAAATA GCTATTTAAA GCGTATATTT
AGTTATTTGT ACGACTATTA TTCAAAAAAT GATTATTATA CAATTAGCGA TATGATGCAA
TATATTGAAT CTAATGAATT GAGAGAAGTT CTTATTGAAT TAGATCAATA TCATCTAAAT
GATGAACCTT ATGAAAACGA AATAGAGGAC TATATTCAAA TTATTAAAAA TAATAATAAC
GAAGATTCCT TAGAAAGTTT GAATTATAAA TTAAGGGAAG CATCGCGTAT TGGAGATTCA
GAATTACAAA AATATTATTT GCAACTTATC GTTAACAAAA ATAAAAATCG AATGTAA
|
|---|
| Protein sequence | MRIDQSVIDE IKNKTDILDL VSEYVKLEKR GRNYIGLCPF HDEKTPSFTV SEDKQICHCF
GCKKGGNVFQ FTQEIKDVSF VEAVKDLGER VNIQVDIGQN QTNSSTKIAS DELKMIEMHE
LIKDYYHYAL MKTVEGEEAL NYLHERGFTD DLIKEREIGY APDNSHFCHD FLEKKGYDIE
LAFEAGLLSR NEENFTYFDR FRNRIMFPLK NGQGRIVGYS GRTYTDQEPK YLNSPETPIF
QKRRILYNLN KARKFIRKQD EIILLEGFMD VIKSDYAGLK QVVASMGTQL SQEHITFLQK
LTQNVTLMFD GDYAGKEATL KTGQALLNQG LNVYVVQLPS GMDPDDYIRK YDNEQFLKFV
QQDKQSFVLF KVKMYQNEIN HNDLAYEKHF KETVRDLSLV NSGIIRNKLI QNIADIFKVN
PETIQYELDA TYQHQMSSNT YPTFQDEPSK QQLILGRLTK NEKAERALIK HLTKDKDTFL
NYYQKIVPED FTNSYLKRIF SYLYDYYSKN DYYTISDMMQ YIESNELREV LIELDQYHLN
DEPYENEIED YIQIIKNNNN EDSLESLNYK LREASRIGDS ELQKYYLQLI VNKNKNRM
|
|---|
| |