| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1005 |
|---|
| Symbol | |
|---|
| ID | 3242037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1019468 |
|---|
| End bp | 1020517 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637167659 |
|---|
| Product | ABC transporter, permease protein |
|---|
| Protein accession | YP_188582 |
|---|
| Protein GI | 57866928 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTAG CTTGGAATGA AATAAAAAGA AATAAAATTA AATTCAGTTT AGTCATTGGC
ATATTAGTAC TTATAAGTTA TTTATTATTC CTACTGTCAG GACTTGCAAA CGGCCTTATT
AAAATGAATA CTGAAGGTAT AGAAAAGTGG AATGCAGACG CTATCATATT AAAAAAAGAA
GCTAATCAAA CCGTAGAGCA ATCCTTATTC AATATATCCA AAGTACAAAA TACTTATGAA
AAATCAACCA CATTAAAACA ACAAGGAGTT ATTATCTCAA ACCATCATCG GGAAGAAAAC
GCGTTACTTT TTGGCGTTAC ACACAAATCA TTTTTAATTC CGCCTATAAT TAAAGGTCAT
CAAGTTGAAA GTTCAAATGA AATAGTCATT GATCAAACAT TAGCTGATAA GGGGTTCAAA
ATAGGTGACA TCTTATCTTT ATCTCAATCA GACGAAAAGC TAAAAGTGGT AGGTATTGTA
GAAAGTGCTA AATATAATGC TTCACCCGTG CTATTCTCTA ATAATCAAAC CATTGAGAAA
CTTAATCCCA AATTATCAAA AGATAAAACA AATGCTATAG TAATCAAAGA CTCAAATTGG
AAAAATCATA AACTTAACAA AGATTTAGAA AGCATTTCAA TATCGCAGTT TATTAAAAAT
CTTCCTGGCT ATAAAGCTCA AAATTTAACT TTGAACTTTA TGATCGTTTT CTTATTTATA
ATTTCAGCAA CAGTAATTGG CGTATTCTTA TATGTTATAA CACTCCAAAA AACACACTTA
TTTGGTGTAC TTAAAGCACA AGGCTTTACC AACTGCTATT TAGCAAAAAT GGTTTTTGCT
CAAACTTTCA TATTATCTTT AATTGGAACA ATCATAGGAT TTCTCTTAAC ACTATTAACA
GGTACATTTT TACCGCCTGT CGTTCCAATT CATTTTAATT TATTAACGAT GTTGATATAT
GGAATTGTTC TTATCATTAT TTCTTTATTA GGCAGTCTAT TTTCTGTGTT GTCTATAATA
AAAATAAATC CACTTAAAGC AATTGGATAG
|
|---|
| Protein sequence | MFLAWNEIKR NKIKFSLVIG ILVLISYLLF LLSGLANGLI KMNTEGIEKW NADAIILKKE
ANQTVEQSLF NISKVQNTYE KSTTLKQQGV IISNHHREEN ALLFGVTHKS FLIPPIIKGH
QVESSNEIVI DQTLADKGFK IGDILSLSQS DEKLKVVGIV ESAKYNASPV LFSNNQTIEK
LNPKLSKDKT NAIVIKDSNW KNHKLNKDLE SISISQFIKN LPGYKAQNLT LNFMIVFLFI
ISATVIGVFL YVITLQKTHL FGVLKAQGFT NCYLAKMVFA QTFILSLIGT IIGFLLTLLT
GTFLPPVVPI HFNLLTMLIY GIVLIIISLL GSLFSVLSII KINPLKAIG
|
|---|
| |