Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0989 |
Symbol | arlR |
ID | 3242089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1007068 |
End bp | 1007727 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637167644 |
Product | DNA-binding response regulator ArlR |
Protein accession | YP_188567 |
Protein GI | 57866897 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.110636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATA TTTTAATCGT AGAAGATGAG CAAAATCTTG CTAGATTTAT AGAGCTTGAG TTAACTCATG AAAATTATAC TGTTGATATA GAGAATGATG GAAAGGCAGG TTTGGACAAA GCATTATCTA AGCCCTATGA TTTATATATT TTAGACTTAA TGCTTCCAAA CATAAATGGT CTAGAAATTT GTAGACAAAT TCGTCAAAAA ACAACTACTC CAATTATCAT CATTACTGCG AAAAGCGAGA CATATGATAA AGTAGCTGGG TTGGACTATG GGGCAGATGA CTACATTGTA AAACCCTTTG ATATAGAAGA ATTGCTGGCA AGAATAAGAG CGGTATTGCG CAGACAGCCA GATAAAGATG TTTTAGATAT CAATGGTATT ATCATTGATA AAGATGCCTT TAAAGTTACT GTTAATGGCC ATCAATTAGA ATTAACTAAA ACAGAATACG ATTTACTATA TGTTTTAGCT GAAAATCGTA ACCACGTCAT GCAACGTGAA CAAATTCTCG ATCACGTATG GGGGTATAAT AGTGAAGTAG AAACGAATGT CGTTGATGTT TATATTCGTT ATTTACGTAA TAAACTCAAA CCTTTTAATA AAGAAAAATC CATAGAAACT GTACGTGGCG TAGGGTATGT GATTCGATGA
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Protein sequence | MTNILIVEDE QNLARFIELE LTHENYTVDI ENDGKAGLDK ALSKPYDLYI LDLMLPNING LEICRQIRQK TTTPIIIITA KSETYDKVAG LDYGADDYIV KPFDIEELLA RIRAVLRRQP DKDVLDINGI IIDKDAFKVT VNGHQLELTK TEYDLLYVLA ENRNHVMQRE QILDHVWGYN SEVETNVVDV YIRYLRNKLK PFNKEKSIET VRGVGYVIR
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