Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0970 |
Symbol | lysA |
ID | 3241529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 988563 |
End bp | 989828 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637167625 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_188548 |
Protein GI | 57866856 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGTTA ATTATAACGA TAACGGCGAA CTGACAATGG GAGGTACAAG CTTAAAAACT ATTGCACAAA GTTTTGGTAC ACCCTCGATT GTTTACGATG AAGACCAAAT TCGTAATCAG ATAAGACGAT ATCATAAAGC ATTTGAAGCA AGTGGTTTAA GCTACAATAT ATCTTATGCC TCAAAAGCTT TCACATGTAT TCAGATGGTC AAATTAATTG ATGAAGAAAA TTTACAATTA GATGTTGTTT CTGAAGGTGA ACTTTATACT GCTCTTGAAG CAGGATTTGA TTCGAAACGT ATTCACTTCC ATGGGAACAA CAAGACGAAA CGCGAGATTC AATATGCATT AGATAATCAG ATTGGTTATT TTGTAGTGGA TACGCTCGAA GAAATAGATC TTATTGATAA ATATGCTGAT AGTAATGTGG ATGTTGTATT ACGTGTGAAC CCTGGTGTTG AAGCACATAC ACATGAATTT ATTCAAACTG GACAGGAAGA TAGTAAATTT GGATTATCAA TCAAACACGG TCTAGCATTA AATGCAGTTA ATAAAGTAAA AGCAACGAAA CATTTGCAAC TTAAAGGAAT ACATTTCCAT ATTGGCTCTC AAATCGAAGG CACTGAGGCG ATGATTAAGA CAGCTAAAAT TGTGCTTAAT TGGTTAGCAA GTGAACGAAT TGAAGTGAGT TTGCTTAACA TAGGTGGTGG TTTCGGAATT AAATATGTCG AAGGAGATGA AAGCTTCCCT ATTGAGCAAG GAATATCTGA AATTACTGAA GCTATTAAAG AAACTGCACA AGCATTGCAG TACAATATTC CTGAAATTGG GATAGAACCT GGCCGTTCAA TTGTTGGAGA AGCAGGTATC ACTTTATATG AGGTTGGTAC AATTAAAGAT ATTCCTGGAG TTAATAAATA TGTATCAGTT GATGGCGGAA TGAGTGATCA CATACGAACT GCACTTTATG GTGCACAGTA TGAGGCGTTG TTAGTTAACA GAAATGAAAA AGCTAATGAA TCTGTAACAA TTGCAGGTAA ACTCTGTGAA TCTGGTGATA TTATCGTACG AGATGCTCAA TTACCCTCTT CTGTTCATAG AGGTGATTAT CTAGCAGTAC TTTCTACTGG TGCGTATCAT TATTCAATGG CTTCAAATTA TAATCAAATG CAAAAACCTT CAGTATTTTT CTTGAAAGAT GGAAAAGCAC GTGAAGTGAT TAAACGTCAA TCATTGAGAC AATTAATTAT TAATGATACA AAATAA
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Protein sequence | MVVNYNDNGE LTMGGTSLKT IAQSFGTPSI VYDEDQIRNQ IRRYHKAFEA SGLSYNISYA SKAFTCIQMV KLIDEENLQL DVVSEGELYT ALEAGFDSKR IHFHGNNKTK REIQYALDNQ IGYFVVDTLE EIDLIDKYAD SNVDVVLRVN PGVEAHTHEF IQTGQEDSKF GLSIKHGLAL NAVNKVKATK HLQLKGIHFH IGSQIEGTEA MIKTAKIVLN WLASERIEVS LLNIGGGFGI KYVEGDESFP IEQGISEITE AIKETAQALQ YNIPEIGIEP GRSIVGEAGI TLYEVGTIKD IPGVNKYVSV DGGMSDHIRT ALYGAQYEAL LVNRNEKANE SVTIAGKLCE SGDIIVRDAQ LPSSVHRGDY LAVLSTGAYH YSMASNYNQM QKPSVFFLKD GKAREVIKRQ SLRQLIINDT K
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