Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0860 |
Symbol | miaB |
ID | 3240403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 871516 |
End bp | 873060 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637167519 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_188442 |
Protein GI | 57866805 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.116218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGAAG AGCAAAGAAA GGCTGGAACG ATAAATATTC TAGCTGAACG TGATCGTAAA GCTGAGAAAG ATTATAGTAA ATACTTTGAA CAAGTGTATC AGCCACCTAG CTTAAAAGAA GCTAAAAAAA GAGGAAAACA AGAAGTTCAA TATAACAGAG ATTTTCATAT AGATGAAAAA TACAAAGGTA TGGGTAAAGG TCGCACTTTT TTAATTAAAA CATATGGATG TCAAATGAAT GCACATGACA CTGAAGTTAT GGCAGGAATA TTAAATGCAT TAGGATATAG TGCTACTTCG GATATTAATG AAGCGGATGT GATTTTAATT AATACATGCG CCATTAGAGA AAATGCTGAA AATAAAGTCT TTAGTGAAAT AGGAAATTTA AAACATTTAA AAAAAGAACG CCCAGATTGT TTAATTGGGG TGTGTGGTTG CATGTCTCAA GAAGAATCAG TCGTAAATAA AATATTAAAA TCTTATCAAA ATGTAGATAT GGTTTTTGGG ACACACAACA TTCATCATTT ACCTGAGATT TTAGAAGAGG CATATTTATC TAAAGCGATG GTAGTTGAAG TATGGTCTAA AGAGGGAGAC ATCATCGAAA ATTTACCTAA AGTGCGTGAC GGTCACATTA AAGCTTGGGT TAATATTATG TATGGTTGCG ATAAGTTTTG TACTTATTGT ATTGTTCCAT TTACTAGAGG AAAAGAACGT AGTCGTCGTC CAGAGGACAT CATTGATGAG GTTAGAGAAT TAGCAAGAGA AGGTTATCAA GAAATTACCT TATTAGGTCA AAATGTAAAT TCATATGGTA AAGATATCGA AGGTCTGGAT TATGAATTAG GTGACTTATT GGAAGATATT TCTAAAATTG ATATACCTCG TGTTCGTTTT ACAACAAGTC ATCCTTGGGA CTTTACAGAT CGAATGATTG AAGTTATAGC TAAAGGTGGG AACATAGTAC CGCATATCCA TTTGCCGGTA CAATCAGGTA ATAACCAAGT ATTAAAGATA ATGGGGCGTA AATATACAAG AGAGAGTTAT CTTGATTTAG TTTCAAGAAT AAAGGAAGCT ATCCCTAACG TAGCTCTAAC TACTGATATC ATAGTAGGTT ATCCAAATGA AACTGAAGAA CAATTTGAAG AAACATTATC ATTATATGAT GACGTTCAAT TTGAGCATGC ATACACATAT TTATATTCAC AAAGAGATGG AACACCAGCA GCTAAAATGA AGGATAACGT ACCTTTAGAA GTGAAAAAAG AACGTTTGCA AAGGCTTAAT AAGAAGGTTG GAATATATTC TCAACAAGCA ATGAGTCAGT ATGAAGGTAA GATTGTTACG GTATTATGTG AAGGTTCTAG TAAAAAAGAT GAGAATGTTC TAGCAGGCTA TACTGATAAA AATAAACTTG TGAATTTTAA AGGACCAAGA GAGAGCATTG GTAAACTCGT TGATGTCAAA ATTGACGAGG CAAAACAATA TTCTTTAAAT GGAACATTTA TACAAGAACA TCAACGTTCA ATGGTGACAC AATAA
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Protein sequence | MNEEQRKAGT INILAERDRK AEKDYSKYFE QVYQPPSLKE AKKRGKQEVQ YNRDFHIDEK YKGMGKGRTF LIKTYGCQMN AHDTEVMAGI LNALGYSATS DINEADVILI NTCAIRENAE NKVFSEIGNL KHLKKERPDC LIGVCGCMSQ EESVVNKILK SYQNVDMVFG THNIHHLPEI LEEAYLSKAM VVEVWSKEGD IIENLPKVRD GHIKAWVNIM YGCDKFCTYC IVPFTRGKER SRRPEDIIDE VRELAREGYQ EITLLGQNVN SYGKDIEGLD YELGDLLEDI SKIDIPRVRF TTSHPWDFTD RMIEVIAKGG NIVPHIHLPV QSGNNQVLKI MGRKYTRESY LDLVSRIKEA IPNVALTTDI IVGYPNETEE QFEETLSLYD DVQFEHAYTY LYSQRDGTPA AKMKDNVPLE VKKERLQRLN KKVGIYSQQA MSQYEGKIVT VLCEGSSKKD ENVLAGYTDK NKLVNFKGPR ESIGKLVDVK IDEAKQYSLN GTFIQEHQRS MVTQ
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