Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0821 |
Symbol | codY |
ID | 3241394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 826348 |
End bp | 827118 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637167480 |
Product | transcriptional repressor CodY |
Protein accession | YP_188403 |
Protein GI | 57866728 |
COG category | [K] Transcription |
COG ID | [COG4465] Pleiotropic transcriptional repressor |
TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.298732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTAT TATCTAAAAC AAGAGAATTA AACACTTTAT TACAAAAACA TAAAGGTATT GCAGTAGATT TTAAAGATGT TGCTCAAACA ATTAGTAATG TTACAGTTAC TAATGTATTT ATTGTGTCGA GAAGAGGTAA AATCTTAGGG TCTTGTTTGA ATGAATTATT AAAAAGTGAA CGCATTAAAG ATATGTTAGA AGATCGACAT ATACCGCGTG AATATACTGA AGAGTTGATG AATGTTAAAC AAACAGAATC GAATATCGAT ATTGATAATG AATTAACTGT ATTTCCGCCA GAGAATAGAG AGGTATTTTT AAATAGTAGA ACAACTATTT TCCCAATTTT AGGTGGTGGC GAAAGACTTG GTACGCTAGT CTTAGGTCGA GTTCAAGACG ACTTCAATGA AAATGACTTA GTATTAGGAG AATATGCAGC CACTGTAATT GGAATGGAAA TTTTACGAGA AAAACATAAT GAAGTCGAAA AAGAAGCTAG AGATAAAGCT GCTATAACAA TGGCAATCAA CTCACTTTCA TATTCAGAAA AAGAAGCAAT TGAACATATA TTTGAAGAAC TTGGTGGTAC AGAAGGTTTA CTTATAGCTT CAAAAGTAGC TGACAGAGTG GGCATTACAC GATCAGTCAT TGTGAATGCT TTACGTAAAC TTGAAAGTGC TGGTGTCATA GAATCACGTT CTCTTGGAAT GAAAGGGACA TTTATTAAAG TAAAAAAAGA TAAATTCCTT GATGAACTTG AAAAAAAATA A
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Protein sequence | MSLLSKTREL NTLLQKHKGI AVDFKDVAQT ISNVTVTNVF IVSRRGKILG SCLNELLKSE RIKDMLEDRH IPREYTEELM NVKQTESNID IDNELTVFPP ENREVFLNSR TTIFPILGGG ERLGTLVLGR VQDDFNENDL VLGEYAATVI GMEILREKHN EVEKEARDKA AITMAINSLS YSEKEAIEHI FEELGGTEGL LIASKVADRV GITRSVIVNA LRKLESAGVI ESRSLGMKGT FIKVKKDKFL DELEKK
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