| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0814 |
|---|
| Symbol | sucD |
|---|
| ID | 3242833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 817022 |
|---|
| End bp | 817930 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637167473 |
|---|
| Product | succinyl-CoA synthetase subunit alpha |
|---|
| Protein accession | YP_188396 |
|---|
| Protein GI | 57866714 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0497664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTAT TTATTGATAA AAATACGAAA GTAATGGTAC AAGGTATCAC AGGGTCTACT
GCCCTTTTCC ATACAAAACA AATGCTTGAT TATGGGACAC AAATTGTTGC AGGGGTAACA
CCTGGTAAAG GTGGACAAGT TGTAGAAGGT GTTCCAGTAT ATAACACTGT TGAAGAAGCT
AAAAATGAAA CAGGAGCTAA TGTATCTGTT GTATACGTAC CAGCACCATT CGCTGCTGAT
TCAATTATTG AAGCAGCTGA TGCCGATTTA GACATGGTTA TTTGTATTAC TGAACATATA
CCTGTTGTTG ATATGGTTAA AGTAAAAAGA TATTTACAAG GTCGTAAAAC ACGTTTAGTA
GGACCAAACT GTCCTGGTGT GATAACTGCC GACGAGTGTA AAATCGGTAT TATGCCGGGA
TATATCCATA AAAAAGGCCA TGTCGGTGTC GTGTCTCGTT CTGGTACATT AACGTATGAG
GCAGTGCATC AATTAACTGA AGAAGGTATC GGTCAAACAA CTGCTGTAGG TATCGGCGGT
GATCCAGTAA ATGGGACTAA CTTTATTGAT GTTTTAAAGG CGTTCAATGA AGATTCTGAA
ACTAAAGCCG TTGTAATGAT TGGAGAAATT GGTGGTACCG CAGAAGAAGA AGCGGCACAA
TGGATTAAAG AAAATATGAA CAAACCTGTA GTAGGTTTTA TCGGCGGTCA GACAGCACCT
CCAGGTAAAC GTATGGGTCA TGCTGGAGCT ATTATTTCAG GAGGTAAGGG TACAGCATCT
GAAAAGATTA AAACATTAAA CGATTGTGGT GTTGAAACTG CAGATACACC TTCTGAAATA
GGAACAACCC TTATTGATGC AGCTAAAAAA GCAGGCATTT ATGAAGAGTT ATTAACTATT
AAAAAATAA
|
|---|
| Protein sequence | MSVFIDKNTK VMVQGITGST ALFHTKQMLD YGTQIVAGVT PGKGGQVVEG VPVYNTVEEA
KNETGANVSV VYVPAPFAAD SIIEAADADL DMVICITEHI PVVDMVKVKR YLQGRKTRLV
GPNCPGVITA DECKIGIMPG YIHKKGHVGV VSRSGTLTYE AVHQLTEEGI GQTTAVGIGG
DPVNGTNFID VLKAFNEDSE TKAVVMIGEI GGTAEEEAAQ WIKENMNKPV VGFIGGQTAP
PGKRMGHAGA IISGGKGTAS EKIKTLNDCG VETADTPSEI GTTLIDAAKK AGIYEELLTI
KK
|
|---|
| |