| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0811 |
|---|
| Symbol | rbgA |
|---|
| ID | 3241418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 814088 |
|---|
| End bp | 814951 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637167470 |
|---|
| Product | ribosomal biogenesis GTPase |
|---|
| Protein accession | YP_188393 |
|---|
| Protein GI | 57866703 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00749287 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATAC AATGGTATCC AGGTCATATG GCTAAAGCCA AAAGACAAGT TAGTGAACAA
CTGAAAAAGG TAGATGTAGT TTTTGAACTC GTCGATGCAC GTATTCCATA CAGTTCGAGA
AACCCTATGA TTGATGATGT CATTAAACAA AAACCTCGAG TAGTAATTTT AAATAAAAAA
GATATGACGA ATTTAAAAGA ATTAGAAAAA TGGGAAACTT ATTTTAAAGA TGAAGGTTTC
TATCCGGTAG CTGTAGATGC AAAACATGGC AAGAATCTTA AAAATGTTGA AGTTGAAGCT
ATAAAAGCAA CTCAAGAAAA ATTTGATCGT GAAAAAGCTA AAGGTTTAAA ACCTAGAGCG
ATAAGAGCTA TGATTGTAGG CATTCCTAAT GTAGGAAAAT CAACACTTAT CAATAAGTTA
GCAAAACGTA GTATCGCCGA AACTGGAAAT AAACCAGGAG TAACAAAACA GCAACAATGG
ATTAAAGTTG GAAAGTCTCT TCAATTACTA GATACACCAG GTATTTTATG GCCTAAATTC
GAAGATGAAG AAGTCGGTAA AAAATTAAGT TTAACTGGTG CAATTAAGGA TAGTATCGTT
CATTTAGATG AGGTAGCTAT TTATGGTTTG AATTTTATGA TTAAACATGA TGTTTCAGCT
TTAAAGAGAC ATTATAATAT TGATACACAT GAAGACGCTG AGATACTCGA TTGGTTTGAT
GCAATTGGAA GAAGAAGGGG ATTGTTACAA AAAGGAAATG AAGTAGATTA TGAATCTGTC
ATTGAGTTGA TCATCAATGA TATGAGAAAT GCAAAAATTG GAACTTATTG TTTTGATATT
TTAAAAGAAA TGAAGAGTGA ATGA
|
|---|
| Protein sequence | MAIQWYPGHM AKAKRQVSEQ LKKVDVVFEL VDARIPYSSR NPMIDDVIKQ KPRVVILNKK
DMTNLKELEK WETYFKDEGF YPVAVDAKHG KNLKNVEVEA IKATQEKFDR EKAKGLKPRA
IRAMIVGIPN VGKSTLINKL AKRSIAETGN KPGVTKQQQW IKVGKSLQLL DTPGILWPKF
EDEEVGKKLS LTGAIKDSIV HLDEVAIYGL NFMIKHDVSA LKRHYNIDTH EDAEILDWFD
AIGRRRGLLQ KGNEVDYESV IELIINDMRN AKIGTYCFDI LKEMKSE
|
|---|
| |