| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0799 |
|---|
| Symbol | rnc |
|---|
| ID | 3241398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 798590 |
|---|
| End bp | 799327 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637167459 |
|---|
| Product | ribonuclease III |
|---|
| Protein accession | YP_188382 |
|---|
| Protein GI | 57866684 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0571] dsRNA-specific ribonuclease |
|---|
| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.807465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTAACC AGAAAAAGAA AGAAATGGTA CATGATTTTC AACAAAAATT TACTGATAAA
ATGAAGTCGT TAGGATTACA TTTTAAAAAT ATTGATTTAT ATCAACAAGC TTTCTCTCAT
TCAAGTTTTA TTAATGACTT TAATATGAAT CGTTTAGAAC ACAACGAACG TTTAGAATTT
TTAGGTGATG CGGTATTAGA ATTGACGGTT TCACGCTATC TTTTTGACAG ACATCCTCAT
TTACCAGAAG GTAATTTGAC AAAGATGCGC GCAACAATTG TTTGTGAACC TTCACTTGTG
ATATTTGCGA ATAAAATTAA ATTAAACGAA CTGATTTTAT TAGGTAAAGG TGAAGAGAAG
ACAGGAGGCA GAACAAGACC TTCCCTTATT TCAGATGCTT TTGAAGCTTT TGTAGGTGCA
CTATATTTAG ATCAAGGTTT AGACACAGTA TGGACATTTG CTGAAAAAGT TATCTTTCCG
TATGTAGAAG ATGACGAGCT CGTTGGTGTC GTAGACTTTA AAACACAATT TCAAGAATAT
GTGCATAGCC AAAATAAAGG AGATGTGACA TACCAATTAA TTAAAGAAGA GGGTCCCGCA
CATCATAGAC TATTTACATC GGAAGTGATT TTAGAAAATA AAGCAGTTGC AGAGGGTAAA
GGAAAGACAA AGAAGGAATC CGAACAAAAG GCAGCAGAAC AAGCGTATAA ACTAATGAAA
AATAAAAAAT CATTATAA
|
|---|
| Protein sequence | MANQKKKEMV HDFQQKFTDK MKSLGLHFKN IDLYQQAFSH SSFINDFNMN RLEHNERLEF
LGDAVLELTV SRYLFDRHPH LPEGNLTKMR ATIVCEPSLV IFANKIKLNE LILLGKGEEK
TGGRTRPSLI SDAFEAFVGA LYLDQGLDTV WTFAEKVIFP YVEDDELVGV VDFKTQFQEY
VHSQNKGDVT YQLIKEEGPA HHRLFTSEVI LENKAVAEGK GKTKKESEQK AAEQAYKLMK
NKKSL
|
|---|
| |