| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0782 |
|---|
| Symbol | fmt |
|---|
| ID | 3241559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 781243 |
|---|
| End bp | 782175 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637167442 |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_188365 |
|---|
| Protein GI | 57866754 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.606283 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA TCATTTTTAT GGGAACACCT GATTTTTCAA CGAAAGTTTT AGAGATGTTA
ATTGCTGAGC ATGAAGTTAT CGCTGTAGTG ACACAACCTG ATAGACCAGT AGGACGTAAG
AAAGTGATGA CACCACCACC AGTAAAAAGA GTAGCTACAA AGCATCAAAT ACCGGTATAC
CAGCCTGAAA AACTTAAAGA TTCTCAAGAA TTAGACGTGT TACTTTCTTT AGAATCAGAT
TTAATAGTAA CGGCTGCGTT CGGTCAACTA TTACCAGAGT CCTTACTCAA TGCACCTAAA
TTAGGAGCTA TTAACGTCCA TGCATCATTG TTACCTAAGT ATAGAGGAGG AGCACCTATA
CATCAGGCTA TCATTGATGG TGAGGAAGAA ACTGGAATCA CGATTATGTA TATGGTTAAA
AAACTTGATG CAGGTAATAT CATCTCGCAA CAATCAATTC GTATTGAAGA AGAAGATAAT
GTTGGTACAA TGCATGATAA ATTAAGCTTT TTAGGTGCCG AATTATTAAA GAAGACACTT
CCTAGTATCA TTGATAATAC CAATGACAGC ATCCCCCAAG ATGATGCACT TGCAACATTT
GCATCTAATA TTCGTCGTGA AGACGAGAGA ATTGATTGGA ATATGAGTGC ACAAGCAATT
CATAACCATA TTAGAGGACT ATCTCCTTGG CCAGTAGCTT ATACAACTAT GAACGAAAAG
AATCTCAAAT TATTTAGCGC TTTCATTGTG AAAGGGAAAA AAGGTAATCC AGGAACAATT
ATTGAAGCTA CTAAGCATGA ACTCATCATA GCTACTGGTT CTGATGATGC GATCGCACTT
ACTGAGATTC AACCTGCAGG AAAAAAACGC ATGAAAGTTA CTGATTATTT AAGTGGTGTA
CAAGAGTCGT TAGTTGGGAA AGTTCTATTA TGA
|
|---|
| Protein sequence | MSKIIFMGTP DFSTKVLEML IAEHEVIAVV TQPDRPVGRK KVMTPPPVKR VATKHQIPVY
QPEKLKDSQE LDVLLSLESD LIVTAAFGQL LPESLLNAPK LGAINVHASL LPKYRGGAPI
HQAIIDGEEE TGITIMYMVK KLDAGNIISQ QSIRIEEEDN VGTMHDKLSF LGAELLKKTL
PSIIDNTNDS IPQDDALATF ASNIRREDER IDWNMSAQAI HNHIRGLSPW PVAYTTMNEK
NLKLFSAFIV KGKKGNPGTI IEATKHELII ATGSDDAIAL TEIQPAGKKR MKVTDYLSGV
QESLVGKVLL
|
|---|
| |