Gene SERP0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0627 
SymbolmenA 
ID3242222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp618425 
End bp619363 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content36% 
IMG OID637167288 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_188212 
Protein GI57866499 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.702273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATC AATATCAACA ATATTCCACT GTTAAGAAGT ACTGGCAATT GATGAGACCT 
CATACTTTAA CAGCCGCTGT TGTCCCTGTA CTCGTTGGTA CTGCAGCAGC TAAAATATAT 
TTACTCGGTA GCGAAGACCA TCTGAAATTC AGTCTTTTCT TAGCTATGTT GCTTGCATGT 
TTGTTAATTC AAGCTGCAAC AAACATGTTT AATGAATACT ATGACTTTAA AAAAGGTCTT 
GATGATCATA CCTCTGTGGG TATTGGTGGC GCTATTGTAC GTAATGGTAT GAGTCCTAAA 
CAAGTAATGA ATTTAGCAAT TGCTTTTTAC ATCATTGCAG CACTTTTAGG TATCTTTTTA 
GCAATACAAA GCTCATTCTG GATTATTCCA GTAGGCATAG TTTGTATGGC AATTGGCTAT 
CTATATACCG GTGGCCCTAT TCCAATTTCA TGGACACCTT TTGGTGAACT ATTTTCAGGA 
TTATTTATGG GTATGATTAT CATACTACTT TCATTTTTCA TACAAACCGG TAATGTTCAA 
GGATATGCCG TATGGTTAAG TATTCCAATA GTCATCACAA TTGGTTTAAT CAATATGGGT 
AACAATATTC GTGACCGTGT TAAAGACAAG GCTAGCGGTA GAAAAACTTT GCCTATACTT 
TTAGGTAAAC GTGCTTCAGT TATTTTTATG GCAATAATGT ATGCCATCGC ATACATCATT 
GTCATCATTA CAGCCTTTTT TAAACCTGCG GGATCACTAT TTTACTTGTT AGTTTTATTA 
TCATTCCCAA TGCCTATTAA AGCAGTGAGA CGTTTTAATA AAAATGATAC ACCTGAAACA 
ATGATGCCTG CGATGGCTGC GACAGGTAAA ACGAATACAT TCTTTGGTTT ATTGTATGCA 
TTAGGAATCT ATATTAGTGC ACTTTTAGGT GCAATCTAA
 
Protein sequence
MSDQYQQYST VKKYWQLMRP HTLTAAVVPV LVGTAAAKIY LLGSEDHLKF SLFLAMLLAC 
LLIQAATNMF NEYYDFKKGL DDHTSVGIGG AIVRNGMSPK QVMNLAIAFY IIAALLGIFL 
AIQSSFWIIP VGIVCMAIGY LYTGGPIPIS WTPFGELFSG LFMGMIIILL SFFIQTGNVQ 
GYAVWLSIPI VITIGLINMG NNIRDRVKDK ASGRKTLPIL LGKRASVIFM AIMYAIAYII 
VIITAFFKPA GSLFYLLVLL SFPMPIKAVR RFNKNDTPET MMPAMAATGK TNTFFGLLYA 
LGIYISALLG AI