| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0555 |
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| Symbol | rexA |
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| ID | 3242211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 542830 |
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| End bp | 546486 |
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| Gene Length | 3657 bp |
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| Protein Length | 1218 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637167220 |
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| Product | exonuclease RexA |
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| Protein accession | YP_188146 |
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| Protein GI | 57866488 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02785] recombination helicase AddA, Firmicutes type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCAA CTAAACCTCA TGATGTGATT TGGACAGATG CACAATGGCA AAGTATTTAT
GCGAAAGGAC AGGACATACT TGTTGCTGCT GCAGCAGGTT CCGGTAAAAC AGCCGTTCTA
GTTGAGCGTA TTATACAACG TATACTAAGA GATGATGTAG ATGTAGATCG GTTACTAGTT
GTAACATTTA CGAATTTAAG CGCACGTGAG ATGAAGCATC GAGTTGATAA ACGTATACAA
GAAGCATCTT TTAAGGATCC TAACAATGAA CATTTAAAGA ATCAGCGAAT CAAAATTCAT
CAAGCACAGA TTTCTACTTT ACACAGTTTC TGTTTGAAAT TGATTCAGCA GCATTATGAT
GTATTAGATA TCGATCCTCA TTTTAGAACA AGTAGTGAAG CGGAAAATAT ATTATTATTA
GAACAAACTA TTGATGATGT TTTAGAACAA CACTATGATA AATTAGATCC TCACTTTATA
GAATTAACCG AACAACTATC ATCAGATAGG AATGATGATC AATTTAGAAG TATTATTAAG
CAGTTATATT TTTTCAGTAT TGCTAATCCT CAACCATTTG AATGGCTCAA TCAATTAGCG
CAACCATACA AAGAAGAAAA TAAACAGCAA CAATTAATGC AGCTTATCAA TGATTTAGCA
ATGATTTTTA TGAAAGCAGG ATATGAGGAA TTACAAAAAA GTTATGACTT ATTCTCAATG
ATGGAAAGTG TTGATAAGCA GCTTGAAGTT ATTGAAACCG AACGCATGTT TATTACTAAA
GCTATTGAAG GTAAAGTATT AAATACAGAT GTTATCACGC AACATGAATT TATGAGTCGT
TTTCCGGCAA TAAATAGCAA GATAAAAGAA GCAAATGAAG GCATGGAAGA TGCTTTAAAT
GAAGCAAAAC AACATTATGA TAAATATAAA TCTTTAGTTA TGAAAGTAAA GAATGATTAT
TTTTCTAGAA ATGCAGAAGA TTTGCAAAGA GATATGCAAC AACTCGCACC TCGAGTGGCT
TATTTAGCTC AAATAGTTCA AGATGTGATT CAATCATTTG GTGTTCAAAA ACGAAGTCGT
AATATTTTGG ATTTTTCAGA TTATGAACAT TTTGCATTAC GCATTCTTAC TAACGAAGAT
GGCTCACCTT CGCGTATCGC TGAAACGTAT CGTGAACATT TTAAAGAAAT CCTAGTTGAT
GAGTATCAAG ATACTAATAG AGTGCAAGAA AAAATATTAT CTTGTATTAA AACTGGTGAA
GAACACGATG GTAACTTGTT CATGGTTGGG GATGTGAAGC AGTCTATTTA TAAATTTAGA
CAAGCTGATC CTAGTTTATT TATTGAAAAA TATAATCGCT TTTCTAGTAG TGGAAATGAA
AGTGGCTTGC GCATTGACTT ATCGCAAAAC TTTCGTTCGA GACAGGAAGT GTTATCTACA
ACCAATTACT TGTTCAAACA TATGATGGAT GAACAAGTAG GAGAAATTTC ATATGATGAT
GCAGCGCAAT TGTATTTTGG TGCACCATAT GACGAAGTTT CACATCCTGT TCAATTACGA
GCACTTGTTG AGGCAAGTTC AGAAAATAGT GACTTAACTG GAAGTGAACA AGAAGCGAAT
TACATTGTTG AACAAGTTAA AGATATTATT AATCATCAAA ACGTATACGA TATGAAAACA
GGTCAATACA GAAAAGCAAC ATATAAAGAT ATCGTAATTT TAGAGCGAAG TTTTGGTCAA
GCGCGTAATC TTCAACAAGC TTTTAAAAAT AATGATATCC CTTTTCACGT AAATAGTAAG
GAAGGGTATT TTGAGCAAAC TGAAGTACGT CTTGTGCTTT CATTTTTAAG AACAATAGAT
AATCCACTTC AAGACATTTA TTTAGTGGGA TTGATGCGTT CTGTAATATA TCAATTTACT
GAAGAAGAAT TAGCTGAAAT AAGAGTTGTA AGCCCTCATG ATGATTACTT TTATCAATCT
ATAAAAAATT ATATGATTGA TGAAAAAGCT GATTCTAGAT TGGTTGACAA GTTAAATCGT
TTTATTCAGG ATATACAAAA ATATCAAAAT TATAGTCAAA GTCAACCGGT TTACCAATTA
ATTGATAAAT TTTATAATGA TCATTTTGTA ATTCAGTACT TTAGCGGTCT TATTGGAGGT
AAAGGTAGAA GAGCAAATCT GTATGGGCTA TTTAATAAAG CTGTTGAATT TGAAAATTCA
AGTTTCAGAG GTTTATTCCA ATTTATTCGT TTTATTGATG AGCTTATTGA TCGTAAAAAA
GATTTTGGTG AAGAAAATGT CGTAGGTCCT AACGATAATG TGGTTAGAAT GATGACGATT
CACAGTAGTA AAGGATTAGA ATTTCCATTT GTAATTTACT CAGGATTATC TAAAAAATTC
AACAAAGGTG ACCTGAATGC ACCAGTTATT CTAAATCAAC AATATGGTTT AGGTATGGAT
TATTTTGATG TAAATAAAGA TATGGCTTTT CCTTCACTTG CCTCTGTGGC ATATAGAGCA
ATAAATGAAA AAGAACTTAT ATCAGAAGAG ATGCGTTTAA TCTATGTTGC GTTGACACGA
GCAAAAGAGC AACTTATTTT AGTTGGAAGA GTCAAAGATG AAAAGTCGTT AATTAAATAT
GAACAATTAG CTGTTTCAGA CACACATATA GCAGTTAATG AACGCCTTAC TGCTACCAAT
CCATTTGTTC TAATTTATGG TGTTTTGGCT AAGCATCAAT CGCCTTCATT GCCAAATGAT
CAAAGATTTG AAAGAGATAT TGATCAATTA AATTCTGAAG TGAAGCCACG TGTATCAATA
GTGATTGATC ATTATGAGGA TGTTTCAACT GAAGAAGTAG TCAATGATAA TGAAATAAGA
ACAATCGAAG AATTAAAGGC CATAAATACT GGTAATGAAG ATGTGAAAAT TAAAATTCAT
CAACAGCTTT CTTATGACTA TCCTTTTAAA GTTAACACGA TGAAACCATC TAAACAGTCG
GTATCAGAGT TAAAACGTCA ATTAGAAACT GAAGAAAGTA ATACAAATTA TGATAGAGTA
CGTCAATATC GTATTGGTGT TGCATCATAT GAAAGACCCA AGTTTCTTAC CCAAACAAAA
AAAAGAAAAG CAAATGAAAT AGGGACTTTA ATGCATACAG TCATGCAACA CTTACCTTTT
AGAGAACAAC GTTTAACAAA AGACGAATTA TTTCAATATA TCGATCGATT GATTGACAAA
CAACTTATTG ATGAAGATGC AAAAGAGGAT ATTAGAATAG ATGAGATTAT GCATTTCATT
GATGGCCCTC TCTATATGGA AATAGCTCAA GCTGACAATG TTTATACTGA ATTACCTTTT
GTGGTAAATC AAATTAAAGT TGATGGACTT ACAAGTGAAG ATGAAGATGT ATCCATTATT
CAAGGTATGA TTGATTTAAT ATATGAAAGT GACGGACAAT TTTACTTTGT TGATTACAAA
ACAGATGCTT TTAATAGAAG AAAAGGTATG AGTGATGAAG AAATAGGGAA TCAGCTCAAA
GAAAAATATC AGATACAAAT GACGTATTAT CGAAATACTT TAGAAACCAT ACTTAAACGA
CCCGTAAAGG GTTACTTATA TTTTTTCAAA TTTGGTACAT TAGAAATAGA TGATTAA
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| Protein sequence | MIPTKPHDVI WTDAQWQSIY AKGQDILVAA AAGSGKTAVL VERIIQRILR DDVDVDRLLV
VTFTNLSARE MKHRVDKRIQ EASFKDPNNE HLKNQRIKIH QAQISTLHSF CLKLIQQHYD
VLDIDPHFRT SSEAENILLL EQTIDDVLEQ HYDKLDPHFI ELTEQLSSDR NDDQFRSIIK
QLYFFSIANP QPFEWLNQLA QPYKEENKQQ QLMQLINDLA MIFMKAGYEE LQKSYDLFSM
MESVDKQLEV IETERMFITK AIEGKVLNTD VITQHEFMSR FPAINSKIKE ANEGMEDALN
EAKQHYDKYK SLVMKVKNDY FSRNAEDLQR DMQQLAPRVA YLAQIVQDVI QSFGVQKRSR
NILDFSDYEH FALRILTNED GSPSRIAETY REHFKEILVD EYQDTNRVQE KILSCIKTGE
EHDGNLFMVG DVKQSIYKFR QADPSLFIEK YNRFSSSGNE SGLRIDLSQN FRSRQEVLST
TNYLFKHMMD EQVGEISYDD AAQLYFGAPY DEVSHPVQLR ALVEASSENS DLTGSEQEAN
YIVEQVKDII NHQNVYDMKT GQYRKATYKD IVILERSFGQ ARNLQQAFKN NDIPFHVNSK
EGYFEQTEVR LVLSFLRTID NPLQDIYLVG LMRSVIYQFT EEELAEIRVV SPHDDYFYQS
IKNYMIDEKA DSRLVDKLNR FIQDIQKYQN YSQSQPVYQL IDKFYNDHFV IQYFSGLIGG
KGRRANLYGL FNKAVEFENS SFRGLFQFIR FIDELIDRKK DFGEENVVGP NDNVVRMMTI
HSSKGLEFPF VIYSGLSKKF NKGDLNAPVI LNQQYGLGMD YFDVNKDMAF PSLASVAYRA
INEKELISEE MRLIYVALTR AKEQLILVGR VKDEKSLIKY EQLAVSDTHI AVNERLTATN
PFVLIYGVLA KHQSPSLPND QRFERDIDQL NSEVKPRVSI VIDHYEDVST EEVVNDNEIR
TIEELKAINT GNEDVKIKIH QQLSYDYPFK VNTMKPSKQS VSELKRQLET EESNTNYDRV
RQYRIGVASY ERPKFLTQTK KRKANEIGTL MHTVMQHLPF REQRLTKDEL FQYIDRLIDK
QLIDEDAKED IRIDEIMHFI DGPLYMEIAQ ADNVYTELPF VVNQIKVDGL TSEDEDVSII
QGMIDLIYES DGQFYFVDYK TDAFNRRKGM SDEEIGNQLK EKYQIQMTYY RNTLETILKR
PVKGYLYFFK FGTLEIDD
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