Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0500 |
Symbol | sufB |
ID | 3240559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 489683 |
End bp | 491080 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167166 |
Product | FeS assembly protein SufB |
Protein accession | YP_188092 |
Protein GI | 57866421 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01980] FeS assembly protein SufB |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.657519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAC AAGCACCTGA TGTTGGGGAT TATAAATACG GATTCCATGA CGAAGATGTT TCCATTTTTA GATCAGAGCG TGGTTTAACG GAAAATATAG TAACAGAAAT CTCTAAAATG AAAGAAGAGC CACAATGGAT GTTAGATTTC CGTTTGAAAG CATTAAAACT ATTCTATAAA ATGCCAATGC CACAATGGGG TGGAGATTTA TCTGAATTAG ATTTTGATGA TATTACGTAT TATGTTAAAC CTTCTGAACA TACTGAACGT TCATGGGATG AAGTGCCTGA AGAAATCAAA CGTACTTTTG ATAAATTAGG TATTCCAGAA GCTGAGCAGA AATACTTAGC TGGAGTTTCT GCACAATATG AATCAGAAGT TGTTTATCAT AATATGGAGA AAGAACTGGA AGAAAAGGGT ATTATTTTCA AAGATACTGA TAGTGCATTA CGTGAAAATG AAGAGTTATT TAGAGAATAT TTTGCGTCAG TGGTACCTGC TGCAGATAAT AAATTTGCTG CATTAAATTC AGCAGTATGG TCTGGTGGTT CATTCATTTA TGTTCCTAAG AATGTTAAAT TAGATACACC ACTACAAGCA TATTTCCGTA TTAACTCTGA GAATATGGGA CAATTCGAAC GTACATTAAT AATTGCTGAT GAAGGTGCAT CAGTAAACTA TGTAGAAGGT TGTACTGCAC CTGTATACTC TACAAGTTCG CTACACTCGG CAGTTGTTGA AATTATAGTA CACAAAGATG CACATGTAAG ATATACTACT ATCCAAAACT GGGCTAATAA CGTATATAAT TTAGTAACTA AACGTACCTT TGTCCATGAG AATGGTAATA TGGAATGGGT AGATGGAAAC TTAGGCTCTA AGTTAACGAT GAAATATCCA AACTGTGTAC TTTTAGGTGA AGGTGCCAAA GGTAGCACAT TATCCATTGC ATTTGCTGGT AAAGGTCAAG TTCAAGATGC TGGTGCTAAA ATGATTCATA AAGCACCTAA TACATCTTCA ACTATTGTTT CTAAATCTAT CTCCAAAAAT GGTGGTAAAG TCATTTATCG TGGTATCGTT CATTTTGGAC GTAAAGCTAA GGGAGCACGT TCAAATATCG AATGTGATAC ATTAATTTTA GATAATGAAT CGACTTCAGA TACTATCCCT TATAATGAAG TGTTCAATGA CAATATTTCA TTAGAACATG AAGCTAAAGT TTCTAAAGTA TCAGAAGAGC AATTATTCTA TCTTATGAGT CGTGGTATTT CTGAGGAAGA AGCGACAGAA ATGATTGTTA TGGGATTCAT TGAGCCGTTC ACAAAAGAAT TACCAATGGA ATACGCAGTA GAAATGAACC GTTTAATTAA GTTTGAAATG GAAGGCTCAA TTGGTTAA
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Protein sequence | MAKQAPDVGD YKYGFHDEDV SIFRSERGLT ENIVTEISKM KEEPQWMLDF RLKALKLFYK MPMPQWGGDL SELDFDDITY YVKPSEHTER SWDEVPEEIK RTFDKLGIPE AEQKYLAGVS AQYESEVVYH NMEKELEEKG IIFKDTDSAL RENEELFREY FASVVPAADN KFAALNSAVW SGGSFIYVPK NVKLDTPLQA YFRINSENMG QFERTLIIAD EGASVNYVEG CTAPVYSTSS LHSAVVEIIV HKDAHVRYTT IQNWANNVYN LVTKRTFVHE NGNMEWVDGN LGSKLTMKYP NCVLLGEGAK GSTLSIAFAG KGQVQDAGAK MIHKAPNTSS TIVSKSISKN GGKVIYRGIV HFGRKAKGAR SNIECDTLIL DNESTSDTIP YNEVFNDNIS LEHEAKVSKV SEEQLFYLMS RGISEEEATE MIVMGFIEPF TKELPMEYAV EMNRLIKFEM EGSIG
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