Gene SERP0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0500 
SymbolsufB 
ID3240559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp489683 
End bp491080 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content34% 
IMG OID637167166 
ProductFeS assembly protein SufB 
Protein accessionYP_188092 
Protein GI57866421 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.657519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAC AAGCACCTGA TGTTGGGGAT TATAAATACG GATTCCATGA CGAAGATGTT 
TCCATTTTTA GATCAGAGCG TGGTTTAACG GAAAATATAG TAACAGAAAT CTCTAAAATG
AAAGAAGAGC CACAATGGAT GTTAGATTTC CGTTTGAAAG CATTAAAACT ATTCTATAAA
ATGCCAATGC CACAATGGGG TGGAGATTTA TCTGAATTAG ATTTTGATGA TATTACGTAT
TATGTTAAAC CTTCTGAACA TACTGAACGT TCATGGGATG AAGTGCCTGA AGAAATCAAA
CGTACTTTTG ATAAATTAGG TATTCCAGAA GCTGAGCAGA AATACTTAGC TGGAGTTTCT
GCACAATATG AATCAGAAGT TGTTTATCAT AATATGGAGA AAGAACTGGA AGAAAAGGGT
ATTATTTTCA AAGATACTGA TAGTGCATTA CGTGAAAATG AAGAGTTATT TAGAGAATAT
TTTGCGTCAG TGGTACCTGC TGCAGATAAT AAATTTGCTG CATTAAATTC AGCAGTATGG
TCTGGTGGTT CATTCATTTA TGTTCCTAAG AATGTTAAAT TAGATACACC ACTACAAGCA
TATTTCCGTA TTAACTCTGA GAATATGGGA CAATTCGAAC GTACATTAAT AATTGCTGAT
GAAGGTGCAT CAGTAAACTA TGTAGAAGGT TGTACTGCAC CTGTATACTC TACAAGTTCG
CTACACTCGG CAGTTGTTGA AATTATAGTA CACAAAGATG CACATGTAAG ATATACTACT
ATCCAAAACT GGGCTAATAA CGTATATAAT TTAGTAACTA AACGTACCTT TGTCCATGAG
AATGGTAATA TGGAATGGGT AGATGGAAAC TTAGGCTCTA AGTTAACGAT GAAATATCCA
AACTGTGTAC TTTTAGGTGA AGGTGCCAAA GGTAGCACAT TATCCATTGC ATTTGCTGGT
AAAGGTCAAG TTCAAGATGC TGGTGCTAAA ATGATTCATA AAGCACCTAA TACATCTTCA
ACTATTGTTT CTAAATCTAT CTCCAAAAAT GGTGGTAAAG TCATTTATCG TGGTATCGTT
CATTTTGGAC GTAAAGCTAA GGGAGCACGT TCAAATATCG AATGTGATAC ATTAATTTTA
GATAATGAAT CGACTTCAGA TACTATCCCT TATAATGAAG TGTTCAATGA CAATATTTCA
TTAGAACATG AAGCTAAAGT TTCTAAAGTA TCAGAAGAGC AATTATTCTA TCTTATGAGT
CGTGGTATTT CTGAGGAAGA AGCGACAGAA ATGATTGTTA TGGGATTCAT TGAGCCGTTC
ACAAAAGAAT TACCAATGGA ATACGCAGTA GAAATGAACC GTTTAATTAA GTTTGAAATG
GAAGGCTCAA TTGGTTAA
 
Protein sequence
MAKQAPDVGD YKYGFHDEDV SIFRSERGLT ENIVTEISKM KEEPQWMLDF RLKALKLFYK 
MPMPQWGGDL SELDFDDITY YVKPSEHTER SWDEVPEEIK RTFDKLGIPE AEQKYLAGVS
AQYESEVVYH NMEKELEEKG IIFKDTDSAL RENEELFREY FASVVPAADN KFAALNSAVW
SGGSFIYVPK NVKLDTPLQA YFRINSENMG QFERTLIIAD EGASVNYVEG CTAPVYSTSS
LHSAVVEIIV HKDAHVRYTT IQNWANNVYN LVTKRTFVHE NGNMEWVDGN LGSKLTMKYP
NCVLLGEGAK GSTLSIAFAG KGQVQDAGAK MIHKAPNTSS TIVSKSISKN GGKVIYRGIV
HFGRKAKGAR SNIECDTLIL DNESTSDTIP YNEVFNDNIS LEHEAKVSKV SEEQLFYLMS
RGISEEEATE MIVMGFIEPF TKELPMEYAV EMNRLIKFEM EGSIG