Gene SERP0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0249 
Symbol 
ID3242467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand+ 
Start bp257149 
End bp257823 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content34% 
IMG OID637166918 
ProductIS431mec-like transposase 
Protein accessionYP_187845 
Protein GI57866205 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATT TCAGATATAA ACAATTTAAC AAGGATGTTA TCACTGTAGC CGTTGGCTAC 
TATCTAAGAT ATGCATTGAG TTATCGTGAT ATATCTGAAA TATTAAGGGA ACGTGGTGTA 
AACGTTCATC ATTCAACGGT CTATCGTTGG GTTCAAGAAT ATGCCCCGAT TTTATATCAG 
ATTTGGAAGA AAAAGCATAA AAAAGCTTAT GACAAATGGC GTATTGATGA GACGTACATC 
AATATAAAAG GAAAATGGAA CTATTTATAT CGTGCCATTG ATGCAGAGGG ACATACATTA 
GATATTTGGT TGCGTAAGCA ACGAGATAAT CATTCAGCAT ATGTATTTAT CAAACGTCTC 
ATTAAACAAT TTGGTAAATC TCAAAAGGTA ATTACAGATC AGGCACCTTC AACGAAGGTC 
GCAATGGCTA AAGTCATTAA AGCTTTTAAA CTTAAACCTG ACTGTCATTG TACATCGAAA 
TATCTGAATA ATCTCATTGA GCAAGATCAC CGTCATATTA AAGTAAGAAA GACAAGATAT 
CAAAGTATCA ATACGGCAAA GAATACTTTA AAAGGTATTG AATGTATTTA CGCTCTATAT 
AAAAAGAACC GCAGGTCTCT TCAGATCTAC GGATTTTCCC CATGCCACGA AATTAGCATC 
ATGCTAGCAA GTTAA
 
Protein sequence
MNYFRYKQFN KDVITVAVGY YLRYALSYRD ISEILRERGV NVHHSTVYRW VQEYAPILYQ 
IWKKKHKKAY DKWRIDETYI NIKGKWNYLY RAIDAEGHTL DIWLRKQRDN HSAYVFIKRL 
IKQFGKSQKV ITDQAPSTKV AMAKVIKAFK LKPDCHCTSK YLNNLIEQDH RHIKVRKTRY 
QSINTAKNTL KGIECIYALY KKNRRSLQIY GFSPCHEISI MLAS