Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0196 |
Symbol | ispD |
ID | 3242812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 205369 |
End bp | 206085 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637166865 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_187792 |
Protein GI | 57866163 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0791243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTATG CGGGTATATT AGCAGGTGGT ATTGGTTCTA GAATGGGAAA TGTTCCATTA CCCAAACAAT TTTTATTATT ACAAGGAAAA CCTATTATTA TTCATACAGT AGAAAAATTT TTAATGTATA AGGACTTTGA TGAAATCATT ATTGCCACGC CTCAAAAGTG GATCAATTAT ATGCACGATT TGCTAAACAA TTATCGATTA GACGATAAGA AAATAAAAGT AATACAAGGC GGCGACGACA GAAATCACAC TATAATGAAT ATTATAGAAA GCATTGAGCA ACATAAAAAA TTAAATGATG AAGATATCAT CGTTACCCAT GATGCAGTTA GACCATTTCT AACAAATCGA ATTATTAGAG AGAATGTGGA ATATGCTAGT CAATATGGCG CTGTAGATAC GGTTGTTAAT GCTGTTGATA CTATCATTTC TTCAAATGAT GCACAATTTA TTTCTGAGAT TCCAATTAGA AGTGAGATGT ATCAAGGACA GACGCCTCAA ACTTTTAAAA TAAAAGAGTT AAAGGATAGC TATTTATCGT TAACTCAATC TCAAAAGGAA ATATTAACTG ACGCGTGTAA AATACTCGTA GAATTGGGTA AGCCAGTAAA ATTAGTCAAA GGAGAGTTAT TTAACATAAA AATTACAACA CCATATGATT TAAAAGTTGC GAATTCAATT ATTACTGGAG CTGTTGATAA TGATTAA
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Protein sequence | MIYAGILAGG IGSRMGNVPL PKQFLLLQGK PIIIHTVEKF LMYKDFDEII IATPQKWINY MHDLLNNYRL DDKKIKVIQG GDDRNHTIMN IIESIEQHKK LNDEDIIVTH DAVRPFLTNR IIRENVEYAS QYGAVDTVVN AVDTIISSND AQFISEIPIR SEMYQGQTPQ TFKIKELKDS YLSLTQSQKE ILTDACKILV ELGKPVKLVK GELFNIKITT PYDLKVANSI ITGAVDND
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