Gene SERP0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0188 
SymbolfusA 
ID3241362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp194988 
End bp197069 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content38% 
IMG OID637166857 
Productelongation factor G 
Protein accessionYP_187784 
Protein GI57866147 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000059659 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAG ACTTTTCTTT GAAAAATACT CGTAATATCG GTATCATGGC TCACATTGAT 
GCTGGTAAGA CAACTACGAC TGAACGTATT CTTTACTACA CAGGTCGTAT CCATAAAATT
GGTGAAACAC ATGAAGGTGC TTCACAAATG GACTGGATGG AACAAGAGCA AGACCGTGGT
ATTACTATCA CATCTGCTGC TACAACTGCA CAATGGCAAG GTCACCGTGT AAACATCATT
GATACTCCTG GACACGTAGA CTTCACAGTT GAAGTTGAAC GTTCATTACG TGTACTTGAT
GGTGCCGTTA CTGTACTTGA TGCACAATCA GGTGTAGAAC CTCAAACTGA AACAGTTTGG
CGTCAAGCAA CAACTTATGG TGTACCTCGT ATTGTTTTTG TAAACAAAAT GGACAAATTA
GGTGCGAACT TTGAATATTC AGTAAGCACT TTACATGATC GTTTACAAGC AAATGCAGCA
CCTATTCAAT TACCTATTGG TGCAGAAGAT GAATTTGAAG CAATCATTGA CTTAGTAGAA
ATGAAATGCT TTAAATATAC AAACGACCTA GGTACAGAAA TCGATGAAAT CGAAATTCCA
GAAGACCATA AAGAAAGAGC TGAAGAAGCT CGCGCTCAAT TAATTGAAGC TGTTGCTGAA
AACAACGACG ATTTAATGGA GAAATATCTT GGGGATGAAG AGATTTCAGT TGATGAATTA
AAAGATGCTA TCCGCCAAGC TACTACTGAC GTAGAATTCT ACCCAGTACT TTGTGGTACA
GCGTTCAAAA ACAAAGGTGT TCAATTAATG CTTAATGCAG TAATTGATTA TTTACCTTCA
CCATTAGATG TTAAACCAAT TATTGGTCAT CGTGCGAACA ACCCTGATGA AGAAGTTGTT
GCTAAACCAG ATGATTCAGC AGAATTTGCT GCTTTGGCAT TTAAAGTTAT GACTGACCCT
TATGTTGGTA AATTAACATT CTTCCGTGTA TACTCTGGAA CATTATCTTC AGGTTCATAT
GTGAAGAACT CTTCTAAAGA TAAACGTGAA CGTGTTGGAC GTTTATTACA AATGCACGCG
AACTCACGTC AAGAAATTGA CACTGTTTAT TCAGGTGAAA TTGCAGCTGC AGTAGGCCTT
AAAGAAACAG GTACTGGTGA TACTTTATGT GGAGAGAAAA ATGACATTAT CTTGGAATCA
ATGGAATTCC CAGAACCAGT TATCCACTTA TCAGTTGAAC CAAAATCTAA AGCTGACCAA
GATAAAATGA CTCAAGCTTT AGTTAAATTA CAAGAAGAAG ACCCAACATT CCATGCACAC
ACAGATGAAG AAACTGGACA AGTTATCATC GGTGGTATGG GTGAATTACA CTTAGATATT
TTAGTTGACC GTATGAAGAA AGAATTCAAC GTTGAATGTA ACGTAGGTGC TCCAATGGTT
TCTTATCGTG AAACATTTAA ACAACCTGCA CAAGTTCAAG GTAAATTCTC ACGTCAATCT
GGTGGTCGTG GTCAATATGG TGATGTTCAT ATTGAATTCA CTCCTAACGA AACAGGTGGC
GGTTTCGAAT TCGAAAACGC TATTGTTGGT GGTGTAGTTC CTCGTGAATA CATTCCATCA
GTTGAACAAG GTCTTAAAGA TGCTATGGAA AATGGTGTCT TAGCTGGTTA TCCATTAATT
GATGTTAAAG CTAAATTATT TGATGGTTCT TATCATGATG TCGATTCATC TGAAATGGCC
TTCAAAATTG CTGCATCATT AGCGCTTAAA GAAGCTGCTA AAAAATGTGA TCCAGTTATC
TTAGAACCAA TGATGAAAGT TACTATCGAA ATGCCTGAAG AATATATGGG TGATATCATG
GGTGACGTGA CTGCTCGTCG TGGACGTGTA GACGGTATGG AACCACGTGG TAATGCTCAA
GTTGTTAACG CATATGTACC ACTTTCAGAA ATGTTTGGTT ATGCAACTTC ATTACGTTCT
AACACGCAAG GTCGCGGTAC TTACACAATG TACTTTGACC ACTATGCAGA AGTTCCTAAA
TCAATTGCTG AAGAAATCAT CAAGAAAAAT AAAGGTGAAT AA
 
Protein sequence
MARDFSLKNT RNIGIMAHID AGKTTTTERI LYYTGRIHKI GETHEGASQM DWMEQEQDRG 
ITITSAATTA QWQGHRVNII DTPGHVDFTV EVERSLRVLD GAVTVLDAQS GVEPQTETVW
RQATTYGVPR IVFVNKMDKL GANFEYSVST LHDRLQANAA PIQLPIGAED EFEAIIDLVE
MKCFKYTNDL GTEIDEIEIP EDHKERAEEA RAQLIEAVAE NNDDLMEKYL GDEEISVDEL
KDAIRQATTD VEFYPVLCGT AFKNKGVQLM LNAVIDYLPS PLDVKPIIGH RANNPDEEVV
AKPDDSAEFA ALAFKVMTDP YVGKLTFFRV YSGTLSSGSY VKNSSKDKRE RVGRLLQMHA
NSRQEIDTVY SGEIAAAVGL KETGTGDTLC GEKNDIILES MEFPEPVIHL SVEPKSKADQ
DKMTQALVKL QEEDPTFHAH TDEETGQVII GGMGELHLDI LVDRMKKEFN VECNVGAPMV
SYRETFKQPA QVQGKFSRQS GGRGQYGDVH IEFTPNETGG GFEFENAIVG GVVPREYIPS
VEQGLKDAME NGVLAGYPLI DVKAKLFDGS YHDVDSSEMA FKIAASLALK EAAKKCDPVI
LEPMMKVTIE MPEEYMGDIM GDVTARRGRV DGMEPRGNAQ VVNAYVPLSE MFGYATSLRS
NTQGRGTYTM YFDHYAEVPK SIAEEIIKKN KGE