| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0183 |
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| Symbol | rpoB |
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| ID | 3241173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 185929 |
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| End bp | 189480 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637166852 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_187779 |
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| Protein GI | 57866134 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0702536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAGGTC AAGTTGTCCA ATATGGAAGA CATCGTAAAC GTAGAAATTA CGCGAGAATT
TCAGAAGTAT TAGAATTACC AAACTTAATA GAAATTCAAA CAAAATCTTA TGATTGGTTC
CTTAAAGAAG GTTTATTAGA AATGTTCAGA GATATTTCTC CAATTGAAGA TTTCACTGGC
AACCTATCTT TAGAATTTGT AGATTACAGA TTAGGTGAAC CTAAATATGA TTTAGAAGAA
TCAAAAAACC GTGACGCTAC TTATGCTGCA CCTCTTCGTG TGAAAGTGCG TCTTATTATT
AAAGAAACTG GTGAAGTTAA AGAACAAGAA GTCTTCATGG GTGATTTTCC ACTGATGACA
GATACAGGTA CGTTCGTAAT TAATGGTGCT GAACGTGTTA TCGTATCTCA ATTAGTTCGT
TCACCATCCG TGTATTTTAA CGAGAAAATC GATAAAAATG GACGTGAAAA CTATGATGCA
ACAATCATTC CTAACCGTGG TGCTTGGTTA GAGTATGAGA CAGATGCTAA AGATGTTGTA
TATGTTCGTA TCGATAGAAC ACGTAAATTA CCATTGACTG TATTACTACG TGCGCTAGGT
TTCTCAACTG ATCAAGAAAT TGTTGACTTA TTAGGAGACA GCGAATATTT ACGTAATACA
TTAGAAAAAG ATGGGACAGA AAATACAGAA CAGGCTTTAT TAGAGATTTA TGAACGTTTA
CGTCCTGGCG AACCACCAAC AGTAGAAAAT GCTAAAAGTT TATTATATTC TCGTTTCTTC
GACCCTAAAC GCTATGATTT AGCCAGTGTA GGTCGTTATA AAGCGAACAA AAAATTACAC
CTAAAACATC GTTTGTTCAA TCAAAAATTA GCAGAACCAA TTGTTAACAG TGAAACTGGT
GAAATTGTTG TTGACGAAGG AACAGTGTTA GATCGTCGTA AACTTGACGA AATCATGGAC
GTATTAGAAA CAAACGCTAA TAGCGAAGTA TTTGAACTTG AAGGTAGCGT AATTGACGAA
CCTGTAGAAA TCCAATCTAT TAAAGTGTAT GTGCCTAACG ATGAAGAAGG TCGTACGACT
ACTGTCATTG GTAATGCATT ACCTGATTCT GAAGTTAAAT GTATTACTCC AGCAGATATT
GTTGCCTCAA TGAGTTATTT CTTCAACTTA TTGAATGGCA TTGGTTATAC AGATGATATT
GATCATCTAG GTAATCGTCG TTTACGTTCT GTCGGTGAGC TATTACAAAA TCAATTCCGT
ATCGGTTTAT CCAGAATGGA ACGTGTTGTT CGTGAAAGAA TGTCAATACA AGATACAGAT
TCTATTACGC CACAACAACT CATTAATATC AGACCAGTTA TTGCATCAAT CAAAGAATTC
TTTGGTAGTT CACAATTATC TCAATTCATG GACCAAGCTA ACCCGTTAGC AGAGTTAACG
CACAAACGTC GTTTATCTGC TCTAGGGCCT GGTGGATTAA CACGTGAACG TGCTCAAATG
GAAGTGCGTG ACGTTCACTA CTCTCACTAT GGGCGTATGT GTCCAATTGA AACACCTGAG
GGTCCTAATA TTGGTTTAAT AAACTCATTG TCAAGTTATG CTAGAGTGAA TGAATTTGGT
TTTATTGAAA CGCCATATCG TAAAGTGGAT TTAGATACAA ACTCAATCAC TGATCAAATA
GATTATTTGA CAGCTGATGA AGAGGATAGT TACGTTGTTG CACAGGCTAA TTCTAGACTT
GATGAAAATG GTCGTTTCTT AGATGATGAA GTTGTTTGTC GTTTCCGTGG TAATAACACT
GTTATGGCTA AAGAAAAAAT GGATTACATG GACGTATCAC CAAAACAAGT TGTTTCAGCA
GCAACAGCAT GTATTCCATT CTTAGAAAAT GACGACTCTA ACCGTGCGTT AATGGGAGCA
AACATGCAAC GTCAAGCGGT GCCTTTAATG AATCCGGAAG CTCCATTTGT GGGTACAGGT
ATGGAACACG TAGCCGCAAG AGACTCTGGT GCTGCAATTA CTGCTAAGCA TAGAGGACGC
GTTGAGCATG TTGAATCTAA TGAAATTTTA GTTCGTCGTT TAGTCGAAGA AAATGGAACT
GAACATGAAG GTGAATTAGA TCGTTATCCT TTAGCGAAGT TCAAGCGTTC AAACTCTGGT
ACTTGTTATA ACCAACGTCC GATTGTATCA ATTGGTGATG TTGTTGAATA CAATGAGATT
TTAGCGGACG GTCCTTCAAT GGAATTAGGA GAAATGGCAT TAGGACGAAA TGTAGTTGTC
GGTTTCATGA CATGGGACGG TTACAACTAT GAGGATGCTG TAATTATGAG TGAACGACTA
GTTAAAGATG ATGTATATAC ATCTATTCAT ATTGAAGAGT ATGAGTCAGA AGCTCGTGAT
ACGAAATTAG GACCTGAGGA AATCACACGT GATATTCCAA ACGTATCTGA AAGTGCACTT
AAGAACTTAG ATGATCGTGG TATCGTTTAT GTTGGTGCAG AAGTTAAAGA TGGTGACATC
TTAGTAGGTA AAGTAACGCC TAAAGGTGTA ACTGAATTAA CAGCTGAAGA GAGATTATTA
CACGCTATCT TTGGTGAAAA AGCACGTGAA GTTCGTGATA CATCATTACG TGTACCTCAT
GGTGCTGGCG GTATCGTTTT AGATGTTAAA GTCTTTAATC GTGAAGAAGG AGACGACACT
CTATCTCCTG GAGTTAACCA ATTAGTACGT GTATATATTG TCCAAAAACG TAAAATACAT
GTTGGGGACA AAATGTGTGG TCGTCACGGT AACAAAGGTG TTATTTCTAA GATTGTTCCA
GAAGAAGATA TGCCTTATTT ACCAGATGGT CGACCAATCG ATATTATGTT AAACCCATTA
GGTGTACCAT CACGTATGAA CATTGGACAA GTATTAGAAT TACATTTAGG TATGGCAGCT
AAAAACTTAG GAATTCACGT TGCTTCCCCA GTGTTTGATG GTGCCAACGA TGATGACGTT
TGGTCAACTA TCGAAGAAGC TGGAATGGCG CGTGACGGTA AAACTGTTCT ATACGATGGA
CGAACTGGTG AACCATTCGA TAATCGTATT TCAGTTGGTG TCATGTACAT GCTTAAACTT
GCACACATGG TAGATGATAA GTTACATGCA CGTTCTACTG GACCATACTC ACTTGTTACA
CAACAACCAT TAGGTGGTAA AGCACAATTC GGTGGTCAAC GTTTCGGTGA GATGGAGGTA
TGGGCACTTG AAGCTTATGG TGCTGCTTAT ACTTTACAAG AAATCTTAAC TTATAAATCT
GATGATACTG TAGGTCGTGT TAAAACTTAC GAGTCTATAG TTAAAGGTGA GAACATTTCT
AGACCTAGTG TTCCAGAATC ATTCCGAGTA TTGATGAAAG AACTACAAAG TTTAGGTCTA
GATGTTAAAG TGATGGATGA GCATGATAAT GAAATCGAAA TGGCTGATGT TGATGACGAA
GATGCAGCAG AACGCAAAGT AGATTTACAA CAAAAGAGTG CTCCAGAATC ACAAAAAGAA
ACTACTGATT AA
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| Protein sequence | MAGQVVQYGR HRKRRNYARI SEVLELPNLI EIQTKSYDWF LKEGLLEMFR DISPIEDFTG
NLSLEFVDYR LGEPKYDLEE SKNRDATYAA PLRVKVRLII KETGEVKEQE VFMGDFPLMT
DTGTFVINGA ERVIVSQLVR SPSVYFNEKI DKNGRENYDA TIIPNRGAWL EYETDAKDVV
YVRIDRTRKL PLTVLLRALG FSTDQEIVDL LGDSEYLRNT LEKDGTENTE QALLEIYERL
RPGEPPTVEN AKSLLYSRFF DPKRYDLASV GRYKANKKLH LKHRLFNQKL AEPIVNSETG
EIVVDEGTVL DRRKLDEIMD VLETNANSEV FELEGSVIDE PVEIQSIKVY VPNDEEGRTT
TVIGNALPDS EVKCITPADI VASMSYFFNL LNGIGYTDDI DHLGNRRLRS VGELLQNQFR
IGLSRMERVV RERMSIQDTD SITPQQLINI RPVIASIKEF FGSSQLSQFM DQANPLAELT
HKRRLSALGP GGLTRERAQM EVRDVHYSHY GRMCPIETPE GPNIGLINSL SSYARVNEFG
FIETPYRKVD LDTNSITDQI DYLTADEEDS YVVAQANSRL DENGRFLDDE VVCRFRGNNT
VMAKEKMDYM DVSPKQVVSA ATACIPFLEN DDSNRALMGA NMQRQAVPLM NPEAPFVGTG
MEHVAARDSG AAITAKHRGR VEHVESNEIL VRRLVEENGT EHEGELDRYP LAKFKRSNSG
TCYNQRPIVS IGDVVEYNEI LADGPSMELG EMALGRNVVV GFMTWDGYNY EDAVIMSERL
VKDDVYTSIH IEEYESEARD TKLGPEEITR DIPNVSESAL KNLDDRGIVY VGAEVKDGDI
LVGKVTPKGV TELTAEERLL HAIFGEKARE VRDTSLRVPH GAGGIVLDVK VFNREEGDDT
LSPGVNQLVR VYIVQKRKIH VGDKMCGRHG NKGVISKIVP EEDMPYLPDG RPIDIMLNPL
GVPSRMNIGQ VLELHLGMAA KNLGIHVASP VFDGANDDDV WSTIEEAGMA RDGKTVLYDG
RTGEPFDNRI SVGVMYMLKL AHMVDDKLHA RSTGPYSLVT QQPLGGKAQF GGQRFGEMEV
WALEAYGAAY TLQEILTYKS DDTVGRVKTY ESIVKGENIS RPSVPESFRV LMKELQSLGL
DVKVMDEHDN EIEMADVDDE DAAERKVDLQ QKSAPESQKE TTD
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