Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0179 |
Symbol | rplA |
ID | 3242992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 183037 |
End bp | 183732 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637166848 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_187775 |
Protein GI | 57866130 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000606052 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAA AAGGTAAAAA GTATCAAGAA GCAGCTAGTA AAGTTGACCG CACTCAATAC TATAGTGTTG AAGAAGCAAT CAAATTAGCT AAAGAAACTA GCGTTGCTAA TTTCGACGCT TCTGTTGAAG TTGCATTCCG TTTAGGAATT GATACACGTA AAAATGACCA ACAAATCCGT GGTGCAGTAG TATTACCACA CGGTACTGGT AAATCACAAC GTGTACTCGT TTTCGCTAAA GGCGATAAAA TCACTGAAGC TGAAGAAGCA GGTGCAGATT ATGTAGGTGA AGCAGATTAC GTACAAAAAA TCCAACAAGG TTGGTTTGAT TTCGACGTAG TTGTAGCTAC ACCTGATATG ATGGGTGAAG TTGGTAAACT TGGTCGAGTA TTAGGACCTA AAGGTTTAAT GCCTAACCCT AAAACTGGCA CTGTAACAAT GGATGTTAAA AAAGCAGTTG AAGAAATCAA AGCTGGTAAG GTAGAATACC GTGCTGAAAA AGCAGGTATT GTACATGCAT CAATTGGTAA AGTGTCATTC GATGAAGAAA AATTAGTTGA TAACTTCAGA ACTTTACAAG ATGTATTAGC GAAAGCTAAA CCAGCTTCTG CTAAAGGTAC TTACTTCAAA TCTGTTGCTG TTACAACAAC AATGGGTCCT GGAGTAAAAG TTGATACTTC ATCTTTCAAA CTATAA
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Protein sequence | MAKKGKKYQE AASKVDRTQY YSVEEAIKLA KETSVANFDA SVEVAFRLGI DTRKNDQQIR GAVVLPHGTG KSQRVLVFAK GDKITEAEEA GADYVGEADY VQKIQQGWFD FDVVVATPDM MGEVGKLGRV LGPKGLMPNP KTGTVTMDVK KAVEEIKAGK VEYRAEKAGI VHASIGKVSF DEEKLVDNFR TLQDVLAKAK PASAKGTYFK SVAVTTTMGP GVKVDTSSFK L
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