| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0158 |
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| Symbol | |
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| ID | 3241012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 162243 |
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| End bp | 163130 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637166827 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_187754 |
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| Protein GI | 57866089 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAA TAGTAGGATC AGATCGAGTT AAAAGAGGAA TGGCTGAAAT GCAAAAAGGC
GGTGTCATTA TGGACGTCGT TAATGCAGAA CAAGCTAAAA TTGCTGAAGA AGCCGGAGCT
GTTGCCGTAA TGGCATTAGA GCGTGTACCA TCAGATATTC GTGCTGCTGG CGGTGTTGCA
CGTATGGCGA ATCCTAAAAT AGTTGAAGAA GTTATGAATG CCGTATCAAT TCCGGTTATG
GCTAAAGCCA GAATTGGTCA TATTACAGAA GCTAGAGTTT TAGAATCGAT GGGTGTTGAC
TATATAGATG AGTCTGAAGT ATTAACGCCT GCAGACGAAG AATATCATTT AAGAAAAGAT
CAATTTACAG TTCCTTTTGT GTGTGGCTGT CGTAACTTAG GTGAAGCAGC ACGACGCATT
GGTGAAGGTG CGGCGATGTT GCGTACGAAA GGTGAACCTG GTACTGGTAA TATTGTTGAA
GCTGTCCGTC ATATGAGACG TGTTAATTCT GAAGTTAGCC GCTTAACAGT TATGAATGAT
GATGAAATTA TGACATTTGC AAAAGATTTG GGTGCACCTT ATGAAGTATT AAAACAAATT
AAAGATAATG GACGTCTTCC TGTAGTTAAT TTTGCAGCTG GTGGTGTTGC TACGCCTCAG
GATGCAGCAC TAATGATGGA ATTAGGTGCA GATGGTGTAT TTGTTGGTTC AGGTATATTT
AAATCTGAAG ATCCTGAAAA ATTTGCTAAA GCTATCGTTC AAGCTACAAC ACATTATCAA
GATTATGAGT TAATCGGAAA ATTGGCTAGT GAGCTAGGTA CGGCTATGAA AGGTCTAGAT
ATTAATCAAA TTTCACTAGA AGAAAGAATG CAAGAGCGTG GTTGGTAA
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| Protein sequence | MSKIVGSDRV KRGMAEMQKG GVIMDVVNAE QAKIAEEAGA VAVMALERVP SDIRAAGGVA
RMANPKIVEE VMNAVSIPVM AKARIGHITE ARVLESMGVD YIDESEVLTP ADEEYHLRKD
QFTVPFVCGC RNLGEAARRI GEGAAMLRTK GEPGTGNIVE AVRHMRRVNS EVSRLTVMND
DEIMTFAKDL GAPYEVLKQI KDNGRLPVVN FAAGGVATPQ DAALMMELGA DGVFVGSGIF
KSEDPEKFAK AIVQATTHYQ DYELIGKLAS ELGTAMKGLD INQISLEERM QERGW
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