Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0142 |
Symbol | |
ID | 3242424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 134374 |
End bp | 135915 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637166795 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_187738 |
Protein GI | 57866057 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACTA AGAGTGAGAC GGCGTTTAAC GGCGTCGTTA TACTTACCTT AGCATTAATT ATTGTGAAGA TACTAAGTGC CATTTATCGC ATTCCGTATC AAAATGTTTT AGGTGATGAC GGTTTATATG CTTATCAACA AATATATCCT GTCGTAGCAC TAGGGGTTAT TTTATCTATG AATGCTATTC CAAGTGCTGT GACTCAAGTG ATAGGTGTTA ATCGATCCGA TGAAGTCTAT ACAAGGGTTA TGTTTCGATT ACAATGCATA GGTTTTATCG TCTTTATTTT GCTTTTTATG TTTGCGAATA TGATTACCCG ATGGATGGGC GATTCTAATT TAGCACCCAT GTTAAAGATG GCCAGTTTTA GTTTTATTTT AATAGGTGTC TTAGGAGTGT TAAGAGGATT TTATCAATCA AAACAAGTAA TGACCATACC AGCAATTTCC CAGGTTATAG AACAGGTAAT TAGAGTTAGT TTAATCATTG TTGCAATTAT TATGTTTTCA ATGAAACACT GGTCTATTTA TCAAGCAGGA GCATTAGCTA TATTGGCATC TTCGATTGGT TTTTTAGGTT CAATGTTATA TTTATTACTT AAAAAACCAC TTAAACTTAA GTTATGCTAT CGCTTTAATA ATACTTCCAT TCAATGGAAG CAGTTGTTTA TTTCCATATC CATATTTGCA TTGAGTCAAC TTATCGTTAT TTTATGGCAA GTTGTGGATA GTTTTACAAT AATACGTTTA TTACAACATA GCGGTATTGC TTTTAAAGAA GCAATTATTC AAAAAGGCAT TTATGATCGT GGTGCTTCAT TTATACAAAT GGGTTTGATT GTAACTACGA CTTTTAGTTT CGTTCTTATC CCATTACTTA CTCAAGCAAT TCGTGAACAT AATCAAATTC ATATGAATCG TTATGCAAAT GCATCAATTA AAATCACGGT AGTAATAAGT ACAGCAGCTA GTATAGGATT AATTAATCTG CTTCCACTTA TGAATGTTGT ATTCTTTAAA AGTAATCATT TAACTCTAAC TTTGAGTGTT TATATGTTTA CAGTGATATG TGTTTCGTTA ATAATGATGA ATATCTCATT ATTACAAGTT CAAACCAGTA TTCGTCCCAT TATTATGGGT GTGATAATAG GAATACTGTC CAAAATTATT TTAAATGTTA TATTAATACC TTTTTGGGGT ATCGTGGGTG CAAGTGTGAG TACAGTCTTA TCACTACTAC TTTTTGTCAT AATATTGCAA GTTGCAGTCT TAAAGTACTA CCGTTTTAAT CGTATATCTT TATTTATCGT TAAACTTATT TTAGGTATGA TAATTATGAG TATAGTTGTT CAAACTGTCA TGCTTGCCTT ACCTTCAAAA AGTAGGATGT TAGGATTACT AGAACTTATA GTTAGCTCAA TTATAGGCAT AGTGATTATA ATGTTGTATA TTATTATATT TAATGTATTA GGATACAAAG AAATAAAGCA CTTACCTTTT GGAGACAAAT TATATCAAAT GAAGAGAGGA AGACGGTCAT GA
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Protein sequence | MKTKSETAFN GVVILTLALI IVKILSAIYR IPYQNVLGDD GLYAYQQIYP VVALGVILSM NAIPSAVTQV IGVNRSDEVY TRVMFRLQCI GFIVFILLFM FANMITRWMG DSNLAPMLKM ASFSFILIGV LGVLRGFYQS KQVMTIPAIS QVIEQVIRVS LIIVAIIMFS MKHWSIYQAG ALAILASSIG FLGSMLYLLL KKPLKLKLCY RFNNTSIQWK QLFISISIFA LSQLIVILWQ VVDSFTIIRL LQHSGIAFKE AIIQKGIYDR GASFIQMGLI VTTTFSFVLI PLLTQAIREH NQIHMNRYAN ASIKITVVIS TAASIGLINL LPLMNVVFFK SNHLTLTLSV YMFTVICVSL IMMNISLLQV QTSIRPIIMG VIIGILSKII LNVILIPFWG IVGASVSTVL SLLLFVIILQ VAVLKYYRFN RISLFIVKLI LGMIIMSIVV QTVMLALPSK SRMLGLLELI VSSIIGIVII MLYIIIFNVL GYKEIKHLPF GDKLYQMKRG RRS
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