Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0119 |
Symbol | |
ID | 3242980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 111697 |
End bp | 113034 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637166772 |
Product | Orn/Lys/Arg decarboxylase |
Protein accession | YP_187715 |
Protein GI | 57866010 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAC CAATAATTCA AAAATTAAAT CACTTGATAG AGAAAAAAGC TATCTCTATG CATGTTCCTG GACATAAAAA CATGACAATC GGCTACTTAA ATAGGCTTGA TTTAGCAATG GATATGACAG AAATTACTGG ATTAGATGAT ATGCATTATC CTGAAGGAAT TATTTTAGAA AGCATGGAGA ATTTTAGGAA ACATAAAAAC TATGATGCTT TCTTATTAGT TAACGGAACG ACTTCAGGTA TATTATCGGT TATCCAAGCG TTTTCGACAA GAAAAGGTAA ATATTTAATT AGTAGAAATG TTCATAAATC AGTATTTCAC GGTTTAGACA TAACACAACA ACAAGCGACA ATAACTAAGA CAGATGTCAG TAAGAAAACG AATCAATATG TAAATCCAAA GATAAATCAA GATAAAAATC AATATTATAA ACTTGCCATC TGTACATACC CTAATTATTA CGGTGAAACT TTTGATATTT CTCAATATAT CAAACAATTA CATCACAGAG GGATACCGAT ATTAGTAGAT GAAGCGCATG GTGCACATTT TGGTTTATAT GGATTTCCAG AATCCTCAAT GAATTTTAAT GCTGATTACG TTGTGCAGTC ATATCACAAA ACACTCCCTG CACTAACAAT GGGATCAGTT ATATATATAC ATAAAGATGC ACCATTAAGA CAACAAGTCA TAGATTATTT AACTTATTTC CAAACGTCAA GTCCTTCGTA CCTCATTATG TCTAGTTTAG AATTAGCGAA TAAATTTTAT AAAGAATATG ATTCTACATT ATTTGACCAA CGAAGAAAGA TGTTAATTGA TTTATTAGTA AATATGGGAT TTACAGTTAT AGAACCAGAG GATCCTTTAA AATTGGTTGT GAGTTTTGAG GGTGTTGAAG GTTATGATGT GCAAAAATGG TTTGAGGATA AAGAAATTTA TGTAGAATTA GCTGATATGT ATCAAGTGTT ACTCGTTCTC CCCCTATGGC ATGAAGGAGA TAAATTTCCT TTTAAGTTGT TGATTGAAAA AATTAGAGAA ATTAACGTGC CAAAAAAATG TACGCGCGAC ATAAAACCTC TTAATTTTAT GACGGGTTTT AGCGAATACA AAACTGTTCA TTTTCAAAAT ACGAAAGAAG TGTCTATTAA AAGGGCAGAA GGTAAAGTTT TAGCACAACA TATCGTTCCA TACCCTCCAG GTATACCGGT GATGTTTAAA GGAGAAGTCG TGACGTCTCA TATGATAGAC TTATTAAATA AATATGATAA ACAAAATATT AAAGTTGAAG GTTTAAATCA TAAAAAAATA TTAGTTAAGG ATGAATAA
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Protein sequence | MKRPIIQKLN HLIEKKAISM HVPGHKNMTI GYLNRLDLAM DMTEITGLDD MHYPEGIILE SMENFRKHKN YDAFLLVNGT TSGILSVIQA FSTRKGKYLI SRNVHKSVFH GLDITQQQAT ITKTDVSKKT NQYVNPKINQ DKNQYYKLAI CTYPNYYGET FDISQYIKQL HHRGIPILVD EAHGAHFGLY GFPESSMNFN ADYVVQSYHK TLPALTMGSV IYIHKDAPLR QQVIDYLTYF QTSSPSYLIM SSLELANKFY KEYDSTLFDQ RRKMLIDLLV NMGFTVIEPE DPLKLVVSFE GVEGYDVQKW FEDKEIYVEL ADMYQVLLVL PLWHEGDKFP FKLLIEKIRE INVPKKCTRD IKPLNFMTGF SEYKTVHFQN TKEVSIKRAE GKVLAQHIVP YPPGIPVMFK GEVVTSHMID LLNKYDKQNI KVEGLNHKKI LVKDE
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