| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0109 |
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| Symbol | gltD |
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| ID | 3242679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 96862 |
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| End bp | 98325 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637166758 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_187705 |
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| Protein GI | 57866097 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCGAAT TTAAAGGATT TATGAAATAT GATAAACAGT CGCTATCAGA ATTGTCTTTG
GTAGACCGTC TTTCGAATCA TGAAGCGTTT CAACAACGCT TCACTAAAGA AGATGCTTCG
ATTCAGGGTG CGCGCTGTAT GGATTGTGGA ACACCTTTTT GTCAAACTGG GCAATCTTAT
GGAAGAGAAA CAATAGGATG CCCTATTGGT AATTATATAC CTGAGTGGAA CGACTTAGTC
TATCATCAAG ATTTTAAAGC TGCTTACGAA AGATTGAGAG AGACGAATAA TTTTCCTGAA
TTTACAGGAA GAGTTTGTCC TGCACCATGT GAGCAATCAT GTGTTATGAA AATTAATAGA
GAATCCGTGG CGATTAAAGG TATTGAACGT ACAATTATTG ATGAAGCATA TGAGAATGAG
TGGGTTCATC CCGCATATCC TGAAGATCAT AAAGACCAAC GAGTTGCTAT CGTAGGTAGT
GGTCCAGCGG GACTTACAGC AGCTGAAGAA TTAAACTTTA AAGGCTATAA AGTTACTGTT
TATGAAAAGG CGCATGAACC AGGCGGCTTG CTAATGTATG GTATACCAAA TATGAAACTA
GATAAAGACG TAATACGTCG ACGTGTATCA CTTATGAAAG ATGCTGGGGT TTTATTTAAA
ACAGGCGTTG AAATTGGCGT CGATGTGAGC CGTGAAACAC TTGAAGAAAA TTATGATGCT
ATTATTTTAT GCACAGGTGC TCAAAATGCG AGAGATTTAC CATTGGAAGG ACGAATGGGC
TCTGGTATTC ATTTTGCAAT GGACTATCTT ACTGAACAAA CACAGTATCT AAATGGTGAG
ATTGAAAGTT TGAGCATTAC TGCTAAAGAT AAGAATGTAA TTATTATAGG TGCTGGTGAT
ACTGGTGCAG ACTGTGTAGC GACAGCATTA CGTGAAAACT GTAAATCTAT TGTTCAATTT
AATAAATATA CGAAACAGCC TGAAGAGATT ACTTTTGAAA GTAATACTTC CTGGCCATTA
GCAATGCCTG TTTTCAAAAT GGATTATGCG CATAAGGAAT ATGAAGCTAA ATTTGGTCAA
GAACCAAGAG CCTATGGTGT ACAAACAATG CGCTATGATG TTGACGAGTT AGGAAATGTT
AAAGGCTTAT ATACACAAAT ATTAAAAGAA ACGCCTGATG GCATGGTGAT GGAAGATGGA
CCAGAACGAT TTTGGCCGGC TGATTTAGTC TTATTATCTA TAGGGTTTGT TGGTACTGAA
ACCACTGTTC CGCATGCGTT TGATATACAC ACCGAGCGTA ATAAAATTGT AGCTAATGAT
ACAAATTATC AAACTAATCA CGCTAAAATA TTTGCTGCAG GAGATGCAAG ACGAGGTCAG
AGTTTGGTTG TTTGGGCAAT AAAAGAAGGT CGTGAAGTAG CACATTCTGT TGATCAATAC
TTAAGTAAAG AAGTTCTAGT GTAA
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| Protein sequence | MGEFKGFMKY DKQSLSELSL VDRLSNHEAF QQRFTKEDAS IQGARCMDCG TPFCQTGQSY
GRETIGCPIG NYIPEWNDLV YHQDFKAAYE RLRETNNFPE FTGRVCPAPC EQSCVMKINR
ESVAIKGIER TIIDEAYENE WVHPAYPEDH KDQRVAIVGS GPAGLTAAEE LNFKGYKVTV
YEKAHEPGGL LMYGIPNMKL DKDVIRRRVS LMKDAGVLFK TGVEIGVDVS RETLEENYDA
IILCTGAQNA RDLPLEGRMG SGIHFAMDYL TEQTQYLNGE IESLSITAKD KNVIIIGAGD
TGADCVATAL RENCKSIVQF NKYTKQPEEI TFESNTSWPL AMPVFKMDYA HKEYEAKFGQ
EPRAYGVQTM RYDVDELGNV KGLYTQILKE TPDGMVMEDG PERFWPADLV LLSIGFVGTE
TTVPHAFDIH TERNKIVAND TNYQTNHAKI FAAGDARRGQ SLVVWAIKEG REVAHSVDQY
LSKEVLV
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