Gene SERP0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0106 
Symbol 
ID3242676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp90027 
End bp91139 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content33% 
IMG OID637166756 
Producthypothetical protein 
Protein accessionYP_187703 
Protein GI57866095 
COG category[S] Function unknown 
COG ID[COG5438] Predicted multitransmembrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCCA AGAATTTTTT TAAAACACCT TTTACTTGGA TGATGATAAT CTTTAGTTGC 
CTGTTTTTAG GTACGTTAAT ATTCACGTTT TTTAACGATA GATTTTATAA TATGCCTATA
GGACAAATCA CTCAAATTAC TGATATCCAA TCACAAAAGG TAACAGACGA GCACAAAAAT
AAAGATATTA AGTACAAAGA GAAGATAACA TTCAAGATTC TAAATGGTGA ATTCAAGGGG
CAAACAACGA CGATTCCCCA CCAATATGTG AAATCTCAAG CTGATTCAGA ATCATTTTCC
AAAAATGACA AGGTTCTTTT ACATATTTCT AAAAATCCTA AAGACGCAAC TATTATAGAG
AAAAAACGAG ATACTATTGT TGTCATAATA ACCGGCTTAT TTTTACTTAC TGTTTTAGTT
GTAGGAAAAA AAGTAGGACT TCAATCTATA TTATCTCTTA TCGTTAATAC CATTGCCGTT
ATGGGAGCTA TTTTAATACA TGATCAATAT GGGGCTATAA GTTTATTCTT TTTGATGACT
TGTGCTATTA TCATTTCCAC TTCTTTCACT TTACTACTTG TAACAGGTTG GCATAGCCGA
ACCTTAATTA CTATTGTAAG TACGCTGATT GGTACGTTCT TATGTGTTGG AATTACCGAA
GTCATCATCA AATTTACCGG GGGAAATGGA ATAAAATACG AAACAATCAC TTTCCTTACT
CTCCCTCCTA AGGATGTCTT TCTAGCTTCC GTACTAATAG GTACACTTGG AGCAGTGATG
GATGTTTCTA TTACTATTGC AAGTGGGATG TACGAAATTT TAAAACGTAG CCCTCAAATT
TCCATGAAAC GTTGGGCTCT TGCCGGAAGA CATATCGGTC AGGATATAAT GGGAACAATG
ACTAATATAC TTCTCTTTTC ATATCTATCT GGTAGCTTAC CTATGTTTCT AATTTATTTA
AAAAATGCTA ACACTATTAC TTATACTATT TCGATGAATT GGTCATTAGA AGTTGCTCGA
GCATTAACTG GTGGGATAGG TATCGTTTTA ACTATTCCTA TAACAATTGC TTTAATGGAA
CTATGGTTTA AACTGCGAGG TGTTAATCAA TGA
 
Protein sequence
MQSKNFFKTP FTWMMIIFSC LFLGTLIFTF FNDRFYNMPI GQITQITDIQ SQKVTDEHKN 
KDIKYKEKIT FKILNGEFKG QTTTIPHQYV KSQADSESFS KNDKVLLHIS KNPKDATIIE
KKRDTIVVII TGLFLLTVLV VGKKVGLQSI LSLIVNTIAV MGAILIHDQY GAISLFFLMT
CAIIISTSFT LLLVTGWHSR TLITIVSTLI GTFLCVGITE VIIKFTGGNG IKYETITFLT
LPPKDVFLAS VLIGTLGAVM DVSITIASGM YEILKRSPQI SMKRWALAGR HIGQDIMGTM
TNILLFSYLS GSLPMFLIYL KNANTITYTI SMNWSLEVAR ALTGGIGIVL TIPITIALME
LWFKLRGVNQ