Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0039 |
Symbol | |
ID | 3242656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 36497 |
End bp | 37372 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637166692 |
Product | hypothetical protein |
Protein accession | YP_187639 |
Protein GI | 57865978 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAC TTAAACATAT TTTATCTTCA TTGTTCGAAC CTTTAACAAA GGTTGAAACA TATGAAAATT TAATTACTAA AGTAATAATG ATTTTAATTT ATATCCTTGT AGCGATTGTT GTTATAGCAA TTTTGAATAA GATTATTGAG CAAGCATTTA AAATTCAAAA TAAAAGCAAA AAAGGAAATA AAAAACGTTC AAAAACACTG ATTTCTCTTG TACAAAACAT AGTAAAATAT ATCGTATGGT TTGTTGTTAT CACAACAATT TTAAGTAAGT TTGGTATTAG CGTCGAAGGT ATCATCGCTA GTGCTGGAGT TGTAGGTATT GCAGTTGGTT TCGGTGCGCA AACGATAGTA AAAGATATTA TTACAGGTTT CTTTATTATC TTTGAAAATC AATTTGATGT GGGTGACTAT GTTAAAATCA ATAGTTCAGG AACTACGGTA GCAGAAGGTA CTGTGAAATC TATTGGTTTA AGATCAACGC GAATTAATAC AATTTCGGGA GAACTGACTA TTTTACCTAA TGGTAGCATG GGGGAAATTA CGAACTTTTC AATTACAAAT GGGACTGCTA TTGTAGAACT ACCAGTATCA GTTGATGAAA ATATAGATCA AGTTGAAAAG AAACTCAATC GTTTATTTGT TTCTTTACGT AGTAAATATT ACTTATTTGT CAGCGATCCA GTTGTTGATG GTATTGATGC GATAGAATCT AATAAGGTTA CTATACGAAT TTCAGCAGAA ACAATTCCTG GTGAAGGATT TTCAGGCGCT CGTATTATTC GTAAGGAAGC TCAAAAAATG TTTAGACAAG AAGGTATTCG CATGCCACAA CCAGTCATTT CAAATTATAA TGAAGGAAAA AGCTAA
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Protein sequence | MNQLKHILSS LFEPLTKVET YENLITKVIM ILIYILVAIV VIAILNKIIE QAFKIQNKSK KGNKKRSKTL ISLVQNIVKY IVWFVVITTI LSKFGISVEG IIASAGVVGI AVGFGAQTIV KDIITGFFII FENQFDVGDY VKINSSGTTV AEGTVKSIGL RSTRINTISG ELTILPNGSM GEITNFSITN GTAIVELPVS VDENIDQVEK KLNRLFVSLR SKYYLFVSDP VVDGIDAIES NKVTIRISAE TIPGEGFSGA RIIRKEAQKM FRQEGIRMPQ PVISNYNEGK S
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