Gene SERP0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0021 
Symbol 
ID3242384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp17991 
End bp18749 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content35% 
IMG OID637166674 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_187621 
Protein GI57865974 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTT TAACAGCAAA TCAATTATCA AAAGTATATG GTCACAAACA AAAATATCGA 
GCTTTAAATA ATATAAGTTT TTCAGTTGAA AAAGGGGAAT TTGTAGCTGT CATGGGTCCT
TCTGGATCAG GTAAAACGAC TTTACTCAAT GTGTTAAGTT CAATAGATAC TATTTCAGGA
GGAACTGTAG AAGTTGAAGG TAAAGAAATT AATAAACTGA GCCACAAAGA AGTGGCAAAT
TTTCGAAAAC AACATCTCGG TTTTATTTTT CAAGATTATA GCGTTTTACC CACATTAACA
GTAAAAGAAA ATATTATGCT ACCACTCTCA GTACAAAAAT TCCATAAATA TGAAATGGAA
CAAAATTATA AAGAAGTGGC TGAGGCATTA GGTATTTATA ACCTGGGAAA TAAATATCCA
AGTGAAATTT CTGGCGGTCA GCAACAACGT ACGGCGGCAG CCCGGGCATT CGTCCATAAA
CCAACAATTA TTTTCGCAGA TGAACCTACT GGCGCATTAG ATTCTAAAAG TGCTCAAGAT
TTGTTACACC GTCTAGAAGA TATGAATAAA CAATTTAATT CAACCATTAT GATGGTGACA
CATGATCCTT CAGCCGCTAG TTACGCTGAG AGAGTCATTA TGTTGAAAGA CGGTGATATA
CACTCAGAAA TCTACCAGGG TAACGATTCA AAACAAACAT TTTACCAAGA AATTATGAAA
CTTCAAACCG CATTAGGTGG TGTCAGTCAT GACATTTAA
 
Protein sequence
MAILTANQLS KVYGHKQKYR ALNNISFSVE KGEFVAVMGP SGSGKTTLLN VLSSIDTISG 
GTVEVEGKEI NKLSHKEVAN FRKQHLGFIF QDYSVLPTLT VKENIMLPLS VQKFHKYEME
QNYKEVAEAL GIYNLGNKYP SEISGGQQQR TAAARAFVHK PTIIFADEPT GALDSKSAQD
LLHRLEDMNK QFNSTIMMVT HDPSAASYAE RVIMLKDGDI HSEIYQGNDS KQTFYQEIMK
LQTALGGVSH DI